| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PHATRDRAFT_36022 |
|---|
| Symbol | |
|---|
| ID | 7201354 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
|---|
| Kingdom | Eukaryota |
|---|
| Replicon accession | NC_011677 |
|---|
| Strand | - |
|---|
| Start bp | 359825 |
|---|
| End bp | 360577 |
|---|
| Gene Length | 753 bp |
|---|
| Protein Length | 250 aa |
|---|
| Translation table | |
|---|
| GC content | 46% |
|---|
| IMG OID | |
|---|
| Product | predicted protein |
|---|
| Protein accession | XP_002180621 |
|---|
| Protein GI | 219119735 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 34 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGCATCTA CCGGGAACCA GCAATTGGCA GTGCATCTCA ATAATATGGC AGTGAGTTTC
CTTACATTCC AGAATCTTAA CAAGGCTTTT GAGTTGCTTC GGGAGGCTTT GTTTCAGACC
ATATGTGTTG TTGACCCCCA CTGTAGCGAG ACTGTCGATG CGTTGGTGGC CGACCGAACC
ACGAAGTCTG GGCCTATACT GTACCAATCA TTGGCAGTGA AAGATTCCGC ATTTCAAGAT
ACCGAAGAGA AAAGAACTGG CTGTTCTTGT GCTTCAATAA CTTTTGTCTA TTCTGATGGG
ATTCGCTTGC TCCCTTCCGG TATCGCCTTT TCCTGTGACA ATCTAGTCAA TGAAATCGCA
GTATCCAGCA TTATAATTTT CAATCTCGGT GTCGCCTACC ATGTGAATGG TCTTGAGACT
TATTCTGGAT CCCAATTAAC AAAATCACTG TCAATGTATC AGAAAGCGTA TGTTTTATTG
CTGGATGTCG GCATCCCCCC CATGCCGACT GGTAATGCAA TGGTGGATCT CCTGTTCATG
GCGCTGTTTA ATAATTTGGC GCATGTTTGT TTCGAGCTCG TCAATTACGA AGAGTCCGAG
CGCTATTTCG ATAGCTTGTA TCGGTTTGCG TACGCAATAT CCCCGATTTT CTACGATGAC
CCCGCAGCTC GCGACGCTAT AGAACAGCAC AAGCGCAACT TTCTACTAAA TGCAATCATT
CTGAAAACCC CGAATTTTGC GAACGCTGCG TAA
|
|---|
| Protein sequence | MASTGNQQLA VHLNNMAVSF LTFQNLNKAF ELLREALFQT ICVVDPHCSE TVDALVADRT
TKSGPILYQS LAVKDSAFQD TEEKRTGCSC ASITFVYSDG IRLLPSGIAF SCDNLVNEIA
VSSIIIFNLG VAYHVNGLET YSGSQLTKSL SMYQKAYVLL LDVGIPPMPT GNAMVDLLFM
ALFNNLAHVC FELVNYEESE RYFDSLYRFA YAISPIFYDD PAARDAIEQH KRNFLLNAII
LKTPNFANAA
|
|---|
| |