Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PHATRDRAFT_35951 |
Symbol | |
ID | 7201319 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
Kingdom | Eukaryota |
Replicon accession | NC_011677 |
Strand | - |
Start bp | 163285 |
End bp | 166008 |
Gene Length | 2724 bp |
Protein Length | 907 aa |
Translation table | |
GC content | 56% |
IMG OID | |
Product | predicted protein |
Protein accession | XP_002180586 |
Protein GI | 219119662 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.390924 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACGAAAC CACGATACAG TCTCTCGAAT ACTTCCGTTG CAAGCAGCGT TACTACGATT TGCACCGCCA AATCGACATC GACTACGACT CCTGTGTCTG ACAGACCGCC TTTGCGACGG ACCAAAGCCC AACGTCAACA AGTACGATAT CAACTGGCTA AGGTTGCTGA TCGCGAAGCC ACCACGGATC CTGATTGTAC AACCGCCACG TCGCAAGAAC GGTTTGTTGC CCAACCCCTC TCGTCTCCTT CTCCCAGTCG GCGAGTTCGC TTCACGGCGT CTACCAAACG ACGCGAGTCG TCGCCGGCGC AATCTCTGTC GCAGCAGTCG CATTCCTCGT CGTCCACTTC ATCATCTGCC GTTCCTACTC TCCCAAATTT TCGTCGCAAG CGTTCCCATG ACTCTCGACA AGGCCTGTGG AGTGACGACG CTACCGTCGA TGGCCGCATC CCACATAAAC CGCCACGCCC TTGTGGCAGC CTCTCCACAA CGCGCAAGGT TCTCCGCGGG GCCGGCATGG ATGTTTACGC CGTGCAAGAT TCCGGGACCC ACCAGCTCTT GTTGGACGAA TGCTTGTTTG CCTGTACGAG TATTAGAGAG GCTTCGTCGC CTCGAGCGGC CTGGGAGGCG GCCGTGCCCC TGGCTTTCAC CCTAGTCCGG AAACAGTCAC GACGCCAATT GTGGCAGTTC AGCACAAGCC ACGAATCGAC GGCGGCCTTG TCGGCGATCT TGGATTTGTG TGGAACCGTT CCGACGCTGC ATACGCGATG GAATCGGAAA GACCCGTTCG TGACCGCGTT TCGGGATGTC TTGGGTATCG TTGCGCACTG TCTTTCGTTG GACTGTACGC TGTCGCCGTA CGCGAGTACG AAACAAGCGA GTAAATTTCG GTACCAAATG TTGGCTCATC CGGACGCTTT GCAAGGACTA CTCAGTCTGG TTTTGGCCGA TCCAATTACG CACCGCTGCC GCGGTGCCGC AGGAGACGAG GCCGCCAACA CGGACAAGGG TGGGACCGCG GACGCAATAG CATCAGATCG TTTACCAGGA GACATTGGGG AGTCGGTTGT ATCCCAGTCG GATACGGGAC ACCACAACTA TCTTCACGAT ACGCCCGCTT CGCAGTCGTC TACAGGTAGT CTGGATCCTA CCATGGCTGG TCGTCGACGT CGCCAACGGC TCCGTACTCA GCAAGCCCAG CCAGTCGGTT CTCCTCATCG CCGTCTGACC ACATGTCCCG AAGAATTCAC GCCCCCCGCG TCGACAACTG ATTCCGCCGC CCCCAGCGAG TTGCTCAGTT TTGCCTCCCG GTCCCCCGGG GGCGACTCGG TCGCTTCCAA TGACAGCGTC TTGGTGCAAG CGCAGGATCA GATGGATCAG GCGACTGCGC GTGTGTTGGA TACGTTGAAA GACAGAGACC GACACGCTGA AAAGCACCCG CATTCGTGTG GCAACGACGT GTTGACCCAC CCGCTCCAGT CCGTTCCATT ACTTGCGGTC CAACGCATTG TTACGGGCAA AGCCGACGAC AACTCGAAAT CGTGTATGGA TGATGAGAGC GTTACAGATC AGCAGGAAAC GAATTGGGAT CCCTCCCAGA CCAAAGGTAG CGACAGACAA CCTGAAGACG ACGACGACGC CAACCCGCTT TTGCGGACGA ATCGGCTCCT TGGTGAGAAC GGAGCAATTC CAATGTTGGC GCAAGCCATG GCGGAGACAC TGGTGGCGGT CACAGTGCTA GTAAGGGATC CGCACGCGTG TGAGGGGTGT TTGCAGTATT TGCACATCCG CGTTGCGACG TTGGCGTCGC TGGTGGACGG GGCTTGTTTA CTGAATGACC GCAATCGACA GGCCTTTTGC AAGGAAGGAT TTACCACCGA ATCGGGAGGT TGTTTAGTCG TGTGTGTCTT GTACGTATTG GAGTCCTTGC TAAACGCGAA CGCTCTGTGG CAGGCCGAAG GTTTGTGTGG TGAAATCGGA CTGGAATGCT TGCGTACGTT GACTTCTCTC ACGCACGAGA ATGAAGTAGC GACTCGTGAG TTAGCCGTGG ACTACCGAGA TCTGGGTTGG AACAAGAACA CGCGAGGTTT GGATATTTTG GCTCGAGTAT TGTGCTTGGC AGTGACAACC AGTGGTCAAC CGAGTGGCAC AGAAAAGTTG CGATACGATG CCGTCATTTT TTGTCTGAAT ACGCTGACAA ACATTGTCGA GTGCGGTGGG AATCTATCAA TGATGGCGAC ACTCACTTTC CCTGTACCGG TTGGCGACGA CTCGGACCAT ATGTTTCTAT CGTGGTTGAC GACGTGGCTG GTAGGCGAAA CCGGTAGCTT CCGCGAGGCG GTAGTGGCGA GTACGTTGGG CAATGCGCAG AGCAAACACG CGGATCGCAA ACTCGAGAAT GAAGAAGACG AGCGTTTAGT AACCGCCGGC AACGGCTTTG TTCTCTTGGC TTGCCTCATG CTTCACAAGA ATGGCGATAC GCAAGGTACA ACGCAAGTGC GGGCCATCCG ACAGATGATT TTGTCCAAAC TGCCAGGCGA CAATGCGGGG GACAAGGTAA CGTTCGTCCA AAACACTCTC ACGGCGTTTT GCAACTTTTA TCACTATTCC ATTGGAGATT TGTCCGTGGC TGTCGTGGCA CCGGTGAAAA AGCTGATTGC CGAGCTGGGA GTCCTGTCAG AAGATCAGAG CTGGTCCCGT AATGTCGACA CACCAAATTG GTAG
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Protein sequence | MTKPRYSLSN TSVASSVTTI CTAKSTSTTT PVSDRPPLRR TKAQRQQVRY QLAKVADREA TTDPDCTTAT SQERFVAQPL SSPSPSRRVR FTASTKRRES SPAQSLSQQS HSSSSTSSSA VPTLPNFRRK RSHDSRQGLW SDDATVDGRI PHKPPRPCGS LSTTRKVLRG AGMDVYAVQD SGTHQLLLDE CLFACTSIRE ASSPRAAWEA AVPLAFTLVR KQSRRQLWQF STSHESTAAL SAILDLCGTV PTLHTRWNRK DPFVTAFRDV LGIVAHCLSL DCTLSPYAST KQASKFRYQM LAHPDALQGL LSLVLADPIT HRCRGAAGDE AANTDKGGTA DAIASDRLPG DIGESVVSQS DTGHHNYLHD TPASQSSTGS LDPTMAGRRR RQRLRTQQAQ PVGSPHRRLT TCPEEFTPPA STTDSAAPSE LLSFASRSPG GDSVASNDSV LVQAQDQMDQ ATARVLDTLK DRDRHAEKHP HSCGNDVLTH PLQSVPLLAV QRIVTGKADD NSKSCMDDES VTDQQETNWD PSQTKGSDRQ PEDDDDANPL LRTNRLLGEN GAIPMLAQAM AETLVAVTVL VRDPHACEGC LQYLHIRVAT LASLVDGACL LNDRNRQAFC KEGFTTESGG CLVVCVLYVL ESLLNANALW QAEGLCGEIG LECLRTLTSL THENEVATRE LAVDYRDLGW NKNTRGLDIL ARVLCLAVTT SGQPSGTEKL RYDAVIFCLN TLTNIVECGG NLSMMATLTF PVPVGDDSDH MFLSWLTTWL VGETGSFREA VVASTLGNAQ SKHADRKLEN EEDERLVTAG NGFVLLACLM LHKNGDTQGT TQVRAIRQMI LSKLPGDNAG DKVTFVQNTL TAFCNFYHYS IGDLSVAVVA PVKKLIAELG VLSEDQSWSR NVDTPNW
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