Gene PHATRDRAFT_35680 details

Gene Information

• Locus tag: PHATRDRAFT_35680
• Symbol: RNAP-II_3
• ID: 7200966
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Phaeodactylum tricornutum CCAP 1055/1
• Kingdom: Eukaryota
• Replicon accession: NC_011676
• Strand: +
• Start bp: 509177
• End bp: 509722
• Gene Length: 546 bp
• Protein Length: 181 aa
• GC content: 53%
• Product: predicted protein
• Protein accession: XP_002180062
• Protein GI: 219118585

Plasmid Coverage information

• Num covering plasmid clones: 25
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGTTTTACG TGAAAACACT CGATCACGAG ATTGTGTTGG AACCCGTGCA TTTCGGTCCC 
AAGCTGAAAG CGACGATTGT CCGTTTGCTC AAAGAGCACG TGGAGGGCTT GGCGTTGGCC 
AACTACGGCT ACGTCGTGAA CGTCATTGAA GTTCCGGAAG ACCAAATTCG CTCCGGCATT 
ATCGAGTACG ACACGGGCAA TGTGGTCTTT ACGGTCAAGT ACACGGCGCT GCTGTTGCGG 
CCGTTTCTGA ACGAAGTACT GGACGCGGTC GTGACCCAGT GCAACGCGCT CGGCTTCTTT 
GCCTTTTGTG GACCGCTGCG TATTTTCGTG TCGAAGCATT CCATGCCCGA AGACATGTTC 
CACGGATTCA ATCACGAACA AGATGCCTGG GTTTCGGACG ATAAGGAAGT CGTGATTGCG 
GCCGGGAGCG GGGTCCGGCT AAAAATCAAA GGCCGAACGG TGGAACAAGG GAATATTACG 
GCAATCGGGA CCATTAAGGA CAATTACTTG GGATTGGTGG ACGATGGTGA AGTACAAGGC 
GATTAG 

 

Protein sequence

MFYVKTLDHE IVLEPVHFGP KLKATIVRLL KEHVEGLALA NYGYVVNVIE VPEDQIRSGI 
IEYDTGNVVF TVKYTALLLR PFLNEVLDAV VTQCNALGFF AFCGPLRIFV SKHSMPEDMF 
HGFNHEQDAW VSDDKEVVIA AGSGVRLKIK GRTVEQGNIT AIGTIKDNYL GLVDDGEVQG 
D