Gene PHATRDRAFT_35240 details

Gene Information

• Locus tag: PHATRDRAFT_35240
• ID: 7200721
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Phaeodactylum tricornutum CCAP 1055/1
• Kingdom: Eukaryota
• Replicon accession: NC_011675
• Strand: +
• Start bp: 419409
• End bp: 421463
• Gene Length: 2055 bp
• Protein Length: 684 aa
• GC content: 52%
• Product: predicted protein
• Protein accession: XP_002179641
• Protein GI: 219117702

Plasmid Coverage information

• Num covering plasmid clones: 21
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGCGGAAG AAGCCAAGAA ACTCTGGAAG GACGAAATTG CGTCCAACAG CGACGTGAAA 
GCCGTCGTAT TCTCGTCCGC GAAACCCGAC ATGTTCATTG CCGGCGCCGA TATCTTTGAC 
ATTAAAGCCG TCGAGAATAA GCAGGACCTG ATTCCCTTTA TCGCCGACGG TGTGAAATTC 
TTTCAAGACA TGCGAGGCAA GGGTGTCCCT CTCGTGGCCG CCATCGACGG ACCCGCCCTC 
GGTGGTGGTC TGGAATGGGC GCTCTGGTGC GACTACCGTA TTTGCACGGA CAGTTCCAAG 
ACCAAAATGG GACTTCCCGA AGTAAAGCTC GGGCTTTTGC CCGGTTTCGG CGGCACGCAG 
AACTTGCATC CCGTCGTGGG CTTGCAAAAC GCCATGGATA TGATGTTGAC GGGGAAGGAT 
ATACGTCCGC ACCAGGCCAA AAAAATGGGC TTGGTGGACC TGGTTGTGGC GCAGGCCTCC 
TTGGAACGTG TCGCGATTGA TTCGGCGGCT GCTCTGGCCA ACGGATCGCT CAAAGCCAAG 
CGCAAATCCA AATCTATGTT TAACAAGATC CTCGAAGACA ACTCGATCGG GCGCAACGTC 
ATTTGGAACC AAATTGACAA AATGGTGCAA AAGAACACCA ACGGCAAGTA CCCGGCACCC 
TACGCCATTA TCGATTGCGT CAAATTCGGT TTAGACAATC CCTCACAAAA GTACCAGCAT 
GAACGTGAGG AATTCGCTAA ACTCGCCGCG ACGCCGGAAT CGGAAGCACT TATTGGTATT 
TTCGACGGCA TGACGCAGAT GAAAAAGCAC TCGTTCGGTG CTGATGCCGC CATTCCGGTC 
AAGACCGTGG CTGTCATGGG TGCGGGGTTG ATGGGAGCCG GGATTGCCCA AGTAACGGCA 
GAAAAGGGGA TCAAAGTCCT ACTCAAAGAC CGCAACGACG AAGCAGTCGG TCGGGGTCAA 
TCCTACATGA CGGAGAATTG GAGCAAAAAG CTCAAACGCA AGCGCATGAC ACAGTATCAG 
TACAACCTGA ATACTTCCAA CGTCACTGCA CTCACCGATG ATAGTCCGAC TTGGCAACGT 
CATTTCGGAA ATGCTGACAT GGTGATTGAA GCCGTGTTCG AAGATTTGGA TCTCAAACGC 
AAGATTGTCG CCAACGTCGA ATCCGTCACC AAGGATCACT GTATTTTTGC CACCAATACA 
TCCGCCATTC CTATCGCCGA TATTGCGCAG GGCGCTTCGC GTCCGGAAAA CATCATCGGT 
ATGCACTACT TCTCACCGGT ACCATCCATG CCCTTACTCG AGATTATTCC ACATACCGGT 
ACGAGTGATA CCGCTACGGC GACCGCTTTC GAAATTGGTT CAAAGCAAGG CAAAACCTGC 
ATTGTGGTCA AGGATGTCCC CGGCTTTTAC GTGAATCGCT GTTTGGGTCC GTATTTGGTC 
GAAGTGTCGG CGCTCGTTCG GGACGGTGTA CCGCTCGAGG CACTCGATAA GTCGCTCAAG 
AATTTCGGCA TGCCGGTGGG CCCCATAACA CTAGCCGACG AAGTCGGTAT TGACGTGAGT 
TCGCACGTGG CCAAGTTCTT GTCCAATGCC GACCTGGGAG TACGCATGGA GGGTGGTGAC 
GTCTCTCTGA TGGAGCAAAT GATTGGCAAA GGATGGCTGG GCAAAAAGTC TGGTCAAGGG 
TTCTACACCT ACAAAGGCAA GAAAAAGACC ATCAACGAGG AAGTACAAAA GTACGTCAAG 
GACTTTGCCA CACGCGACTT GAAATTAGAC GAGAAGGAAA TCCAAGATCG CATCGTGAGT 
CGCTTTGTGA ACGAAGCGGC CAAATGCTTG GAAGACGAGA TCATTGAAAA TCCTGTCGTT 
GGTGACATTG GTCTGGTGTT CGGTACAGGC TTTGCCCCCT TCCGGGGTGG TCCGTTCCGG 
TACCTAGATC AGGTCGGCGT CGCATCGTAC GTAGATCGCA TGAACACGTT CACCGACAAG 
TACGGTCCGC AATTCGAACC GTGTCAACTA CTGAAGGATT ATGCCGCAAC GGACAAAAAG 
TTTCACAAAC GGTAG 

 

Protein sequence

MAEEAKKLWK DEIASNSDVK AVVFSSAKPD MFIAGADIFD IKAVENKQDL IPFIADGVKF 
FQDMRGKGVP LVAAIDGPAL GGGLEWALWC DYRICTDSSK TKMGLPEVKL GLLPGFGGTQ 
NLHPVVGLQN AMDMMLTGKD IRPHQAKKMG LVDLVVAQAS LERVAIDSAA ALANGSLKAK 
RKSKSMFNKI LEDNSIGRNV IWNQIDKMVQ KNTNGKYPAP YAIIDCVKFG LDNPSQKYQH 
EREEFAKLAA TPESEALIGI FDGMTQMKKH SFGADAAIPV KTVAVMGAGL MGAGIAQVTA 
EKGIKVLLKD RNDEAVGRGQ SYMTENWSKK LKRKRMTQYQ YNLNTSNVTA LTDDSPTWQR 
HFGNADMVIE AVFEDLDLKR KIVANVESVT KDHCIFATNT SAIPIADIAQ GASRPENIIG 
MHYFSPVPSM PLLEIIPHTG TSDTATATAF EIGSKQGKTC IVVKDVPGFY VNRCLGPYLV 
EVSALVRDGV PLEALDKSLK NFGMPVGPIT LADEVGIDVS SHVAKFLSNA DLGVRMEGGD 
VSLMEQMIGK GWLGKKSGQG FYTYKGKKKT INEEVQKYVK DFATRDLKLD EKEIQDRIVS 
RFVNEAAKCL EDEIIENPVV GDIGLVFGTG FAPFRGGPFR YLDQVGVASY VDRMNTFTDK 
YGPQFEPCQL LKDYAATDKK FHKR