Gene PHATRDRAFT_35118 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPHATRDRAFT_35118 
Symbol 
ID7200507 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePhaeodactylum tricornutum CCAP 1055/1 
KingdomEukaryota 
Replicon accessionNC_011675 
Strand
Start bp95881 
End bp96786 
Gene Length906 bp 
Protein Length301 aa 
Translation table 
GC content53% 
IMG OID 
Productpredicted protein 
Protein accessionXP_002179578 
Protein GI219117570 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGGGCGGT TGGCAAGGAT TGCTTTCCAT GCTGGGCGAT CGAGCGCGAA TTCCACACCA 
TTCTTGCTTG GCAAACCGTA CCCTCGTGGG GGCGCGTGGC GATGTTTCTC GTCCACACCG
CCCGAACATT GTGAGATTGT GCAGGGTCCT TCTCTGTTGC GGACTTCAAC TACCAGGCCA
TCACCATCCT TACTGCACAT TCCTGGACTG CGGTCGCTAC CGTTTTGGAC GCAATACGAC
AAAGACCAGG ACTTCAATCG GGTGGCTTAC CAAGATCCAA CCGTCTCCGA GGCCGTGCAG
TATCTCGAAC AGCACTGGGA GACCATACGA CGCGAATACG CCGAGAAGGC TCCGAAACTA
GCATCGGACT ACCAAACGGA TACCGAACAC ACATTGCACA AAGGAACTTG GGACTGGCAT
TCGTACATGC TCAAGGGAAA AGTCCAACCG AATTTTGAAA AGCATTTTCC CCGAACCGCA
ACTATATTGC AAGTCTTTCG GGACGAAGGG CTACTATTTG AAGGAACACC GTTTGGGTAC
GCCTTTTTTT CCACGCTGCA CGCCCAGAGC AAAATTGCGG CACATTCGGC TCCCATGAAT
TTCCGCGTCC GCATCCATTT GCCCTTGATC GTACCCGCAA ATATGCCAAG CGCAGCTCCG
GTCAGCGAAC AAGACGGTCG CCCCTCGGTT GGTATCCGCG TAGGTCCTGT GGTGCGGCAG
TGGCACCCGG GTAAGGCATT GGTCTTGGAC GATGCCTACA ATCACGAAGT TTGGAATCAC
ACACACGAAT CAAGGGTTTT GCTTTTGATA GACCTCTGGC ATCCCGACAT AACAACTCAA
GAAAAGCAGG ACATCATTGG TCTCTTCAAA CACGCTGAGG AACAAGGCTG GTTATCTGGC
GAATAA
 
Protein sequence
MGRLARIAFH AGRSSANSTP FLLGKPYPRG GAWRCFSSTP PEHCEIVQGP SLLRTSTTRP 
SPSLLHIPGL RSLPFWTQYD KDQDFNRVAY QDPTVSEAVQ YLEQHWETIR REYAEKAPKL
ASDYQTDTEH TLHKGTWDWH SYMLKGKVQP NFEKHFPRTA TILQVFRDEG LLFEGTPFGY
AFFSTLHAQS KIAAHSAPMN FRVRIHLPLI VPANMPSAAP VSEQDGRPSV GIRVGPVVRQ
WHPGKALVLD DAYNHEVWNH THESRVLLLI DLWHPDITTQ EKQDIIGLFK HAEEQGWLSG
E