| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PHATRDRAFT_35036 |
|---|
| Symbol | |
|---|
| ID | 7200039 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
|---|
| Kingdom | Eukaryota |
|---|
| Replicon accession | NC_011674 |
|---|
| Strand | - |
|---|
| Start bp | 931205 |
|---|
| End bp | 932038 |
|---|
| Gene Length | 834 bp |
|---|
| Protein Length | 277 aa |
|---|
| Translation table | |
|---|
| GC content | 52% |
|---|
| IMG OID | |
|---|
| Product | predicted protein |
|---|
| Protein accession | XP_002179539 |
|---|
| Protein GI | 219117489 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 0.492894 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACCACGA ACACGGAATG GCCGAGACCT CGGTGGCGTA GGCGACGATC CCTCCGATCC
TTTCGTAGTT TTAGACGCCT GGAGATGTTG ACACTTTTGC TCCTCCGAAT CGTGCTTTTG
GAAGCACCAT TGTTGCTTTC GTTGGCACTG CTTTTAACGA CACATGCTTT GGAACTATAC
ATCCACCAAG TCGTCGAACC GGACCTCCAA GCCCGACAGT CGAGCAAGCG CTTCCGGGAT
GGCTCGACCT GCTTAGAGAC AACGGGGTAC AGGAACACTA TGCAAACGCC AACTGTGTAT
CCAACAACCG CTTCGGGCCC GGCGCTTTGT CCGCAACAAC TTCCCGAATT GATCTCGCGA
TCGAAGGCCG ACCTTCTACG GGGCTATATT CTCGGCAGCT TATCGATGGA TGAAGATATC
GCTATCTCAC ACAGGACAAA CGTAGTGGGT GAACAGTCAT GGACCCTTGT TGTAGATGAG
CATCCAGCGG TTTCGCTATT TCTTGAGGAA CTCTTCAATA ATCCATTCTT GGACGCTTTG
CTCAAGCAAC TACTTGGCGA CGACGCTGCC GTCGTCGGAT TTCGCGTCTC CGTAAGCCCG
AGCACAAAAT CATTGGAGCA GGAATCTGTC CCTAAACTTG CTTGTGAGGA ATCCGGCCGA
ATCACAGCTG CCACGTTGAC AATTCCTCTC CACGACTCCA ACGTTGTCAC CAGCTCAGGC
GAGCTCTCCC CCGAGGTGCC CATTTGGCCG ACTAGTAGCG GCCATTTGTG TATTCACAGT
CAACCAAGCG CGCGTTCTTT GCCGTACATT GATTTTGGTG GTAACAAAAC TTGA
|
|---|
| Protein sequence | MTTNTEWPRP RWRRRRSLRS FRSFRRLEML TLLLLRIVLL EAPLLLSLAL LLTTHALELY
IHQVVEPDLQ ARQSSKRFRD GSTCLETTGY RNTMQTPTVY PTTASGPALC PQQLPELISR
SKADLLRGYI LGSLSMDEDI AISHRTNVVG EQSWTLVVDE HPAVSLFLEE LFNNPFLDAL
LKQLLGDDAA VVGFRVSVSP STKSLEQESV PKLACEESGR ITAATLTIPL HDSNVVTSSG
ELSPEVPIWP TSSGHLCIHS QPSARSLPYI DFGGNKT
|
|---|
| |