| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PHATRDRAFT_34976 |
|---|
| Symbol | |
|---|
| ID | 7200010 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
|---|
| Kingdom | Eukaryota |
|---|
| Replicon accession | NC_011674 |
|---|
| Strand | - |
|---|
| Start bp | 788784 |
|---|
| End bp | 789530 |
|---|
| Gene Length | 747 bp |
|---|
| Protein Length | 248 aa |
|---|
| Translation table | |
|---|
| GC content | 50% |
|---|
| IMG OID | |
|---|
| Product | predicted protein |
|---|
| Protein accession | XP_002179508 |
|---|
| Protein GI | 219117427 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 47 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGTCCGTG TAATTGTGGT CACCAAGTGT GAAGACGTAC CAACCAAGCC AGTTGATGAC
AAACCAATGC TCGTCTACTG GAATCTCCTA GGTCTCGTTC AGTTCAACCG TTTTGCATTA
ATCCAGGCTG ACGTGGACTT TTGCGATGTG CGGATCGACG CCGATGAACC ATCCTGCGCC
AATTTTCGCA AGTGCTGGAT GGATGCGAAA GCGGGGGCTC TCCAGGACGT TTTGGATTTT
CCCAATCTTC CCTATTTCTT GGACGGTCAC GGAGAGAACA AGATTGCGCT GACGCAATCC
AACGCTATCC TTCGTCACAT TGGCCGACGC TACAATCTCA TGGGAAACCC TTGCAAAGAA
CATCTGGTGG ACATGATTGT GGATGAACTT AGTGACGTGG AAAGTAACAT TACTCGCCGA
GCATACGCTC ACGGAAAAGA CGCCATTGCC AGCTGGTACG AGACGGATAT TCCGGACGTG
ATGAAACGCT TTCTACCTAT GATTGATAAT AGCTTCCTTA CGGGCGACCA GGTATCCATT
GCGGACTGCA AGTTCTACTC ATTTTTGTAC AAGCTACAAC TAATTGAAGA CGAGATGGGG
GGTCCCAAGA CAGCCGACAT CATGAACGAC ACCGTGCGCG CGTATATGCA GCGTTTTGAG
GCGCTACCTC GCATCAAGGC TTACATGGCA AGCCCTGACT ATCAAAAAGG TCCCTTGAAC
AATCGACACG CCAAGTGGGG TGGCTAA
|
|---|
| Protein sequence | MVRVIVVTKC EDVPTKPVDD KPMLVYWNLL GLVQFNRFAL IQADVDFCDV RIDADEPSCA
NFRKCWMDAK AGALQDVLDF PNLPYFLDGH GENKIALTQS NAILRHIGRR YNLMGNPCKE
HLVDMIVDEL SDVESNITRR AYAHGKDAIA SWYETDIPDV MKRFLPMIDN SFLTGDQVSI
ADCKFYSFLY KLQLIEDEMG GPKTADIMND TVRAYMQRFE ALPRIKAYMA SPDYQKGPLN
NRHAKWGG
|
|---|
| |