| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PHATRDRAFT_34902 |
|---|
| Symbol | |
|---|
| ID | 7200267 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
|---|
| Kingdom | Eukaryota |
|---|
| Replicon accession | NC_011674 |
|---|
| Strand | - |
|---|
| Start bp | 627677 |
|---|
| End bp | 628552 |
|---|
| Gene Length | 876 bp |
|---|
| Protein Length | 291 aa |
|---|
| Translation table | |
|---|
| GC content | 54% |
|---|
| IMG OID | |
|---|
| Product | predicted protein |
|---|
| Protein accession | XP_002179472 |
|---|
| Protein GI | 219117355 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 31 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGTCAAAG CATTGCAATC GCTCCGAAGG ACGACGAGGC TCCCCAGAGG GTCTACGATA
ATCCTGTTTA CTTTGTCCCT CGCCACGTTG ACGGTGGCGG TCCTTACATT CCTGGTATTC
TCAGAAGTTC AAACACAGTT CGAGCCGTTA GGGACACATA CGCCGTGTGA GATAGGAGTA
CTTTACAGGG GGCCAGCGGG CATTCCCGCG TTGCGCAGCA AAGCCGATCT GGGACCGCTA
ATGCAAGCAC GTGGATTTAC AGACGGCGCC GAAGTAGGTG TGCAGAGCGG CGTCCACGCG
CAACAAATTC TCCAAGCCTG GACCAGCTGT CAGAAGTTTC ATCTGGTGGA CTTGTGGGGG
CATCAAGAAA ACTACAAAGA TTCGGCCAAT GTTGTTCAAG ACAAACAGGA CAGCCTCTTT
CAATCCACAC AGAATCGGCT GCAACCATGG AGGCACATTA CAACCTTCCA CCGGATGCTT
TCGACGCAAG CGGCACAGCG AATTCCGGAC CAGTCCCTGG ACTTTTTCTA CATTGATGCT
CGCCACGACT ACTGCGGTGT CACAGAAGAT TTGCGAGCAT ATTACCCGAA ACTCCGACCG
GGAGGTATTC TAGCGGGGCA CGACTTCTTA TCCGCTGCTG AGATCAAGGC ATCGGACCCC
GCTCAAGACT GGTCCCTTTG TATGGATGGC ACGGTAAACG CGGGAGCGGT CAAAGGTGCG
GTGGAGCAGT TTGCTCTGGA CGAAGGTCTA ACTTTTTCCG TCGTGTACGC CATGAACGGA
GTTTATCGAT CGTGGCTTCT GCAGAAACCC ACGCGCATGG AGTGCGTTGA GACTATGGGA
GGCTACGGCT CAGATCTAGT GCGACCCGTG AAATAA
|
|---|
| Protein sequence | MVKALQSLRR TTRLPRGSTI ILFTLSLATL TVAVLTFLVF SEVQTQFEPL GTHTPCEIGV
LYRGPAGIPA LRSKADLGPL MQARGFTDGA EVGVQSGVHA QQILQAWTSC QKFHLVDLWG
HQENYKDSAN VVQDKQDSLF QSTQNRLQPW RHITTFHRML STQAAQRIPD QSLDFFYIDA
RHDYCGVTED LRAYYPKLRP GGILAGHDFL SAAEIKASDP AQDWSLCMDG TVNAGAVKGA
VEQFALDEGL TFSVVYAMNG VYRSWLLQKP TRMECVETMG GYGSDLVRPV K
|
|---|
| |