Gene PHATRDRAFT_34582 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPHATRDRAFT_34582 
Symbol 
ID7199673 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePhaeodactylum tricornutum CCAP 1055/1 
KingdomEukaryota 
Replicon accessionNC_011673 
Strand
Start bp961897 
End bp962901 
Gene Length1005 bp 
Protein Length334 aa 
Translation table 
GC content53% 
IMG OID 
Productpredicted protein 
Protein accessionXP_002179097 
Protein GI219116604 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAATTCGA AGATTCTCGT TGTCTGTTGG GCATCCCTCG CGCTGTCCTC GGCTAGCGCT 
TTTAGTGTCC GTCCTTTGTC ATCGACGGCG AGCACCAGCT TGCGCAGGAC TACTCTAGAG
GCTCGCAAGG TTCCTTTTTC AAAATACCAC GGGCTCGGTA ATGATTTCAT TCTGATTGAT
GATCGAGATA AGTCCGAACC GTCCTTGACT CCGGAGGAAT CTGCAATGCT CTGTCACCGC
AATTTCGGGA TCGGCGGAGA CGGTGTTATC TTTGCCCTCC AACCGCCGTC GGAGAGCGGT
GACGGTGCGG ACTTTGACTT TACCATGCGC ATTTACAACT CCGACGGAAG CGAGCCAGAA
ATGTGTGGCA ACGGAATCCG TTGTATGGCA CAATTTTTGA AAGACTTGGG AGAATCCAAG
TCCGACGACG GCGCCTACCA AATTCATACC CTCGCCGGAC GCATCGTGCC CGTCATGAAC
GAGGACGGGA CAATTACGGT GGATATGGGA GAACCCTTTT TGGAAGCTGC CAAGGTACCG
ACAACTTTGG AGGCGAACGC GGAACACGAT TCGGTGGTCG AACAGACGTT AGAAGCCAAC
GGCAAGACGT GGAAATGTAC AGCGGTGGGG ATGGGGAATC CCCACGCCAT TTTCTTTGTG
AACGACCTAG AAAAGGATAT AGATTTCGAA AAAGATGGAC CAGCATTGGA AGCACACGAA
TCCTTTCCTG CCAAAACGAA CGTTGAGTTT GTTCAAGTTA AAGGCGATGA TCATCTGATC
ATGAAGGTTT GGGAACGTGG TGCCGGTCCG ACTTTGGCCT GCGGCACGGG GGCCTGCGCA
CTGACGGTCG CGGCTATGCG GGCTGGAAAG ATTCCCCGCG GGGATCAACC CGTGCGCGTG
ACTTTGCCCG GTGGTGATTT GTGGATCGAG TGGCGGGAAT CGGACAACAA GATATACATG
ACCGGACCTG CAACTTTTGC CTTTGCTGGT GAAACGAAAG TGTAG
 
Protein sequence
MNSKILVVCW ASLALSSASA FSVRPLSSTA STSLRRTTLE ARKVPFSKYH GLGNDFILID 
DRDKSEPSLT PEESAMLCHR NFGIGGDGVI FALQPPSESG DGADFDFTMR IYNSDGSEPE
MCGNGIRCMA QFLKDLGESK SDDGAYQIHT LAGRIVPVMN EDGTITVDMG EPFLEAAKVP
TTLEANAEHD SVVEQTLEAN GKTWKCTAVG MGNPHAIFFV NDLEKDIDFE KDGPALEAHE
SFPAKTNVEF VQVKGDDHLI MKVWERGAGP TLACGTGACA LTVAAMRAGK IPRGDQPVRV
TLPGGDLWIE WRESDNKIYM TGPATFAFAG ETKV