Gene PHATRDRAFT_34138 details

Gene Information

• Locus tag: PHATRDRAFT_34138
• ID: 7197648
• Type: CDS
• Is gene spliced: Yes
• Is pseudo gene: No
• Organism name: Phaeodactylum tricornutum CCAP 1055/1
• Kingdom: Eukaryota
• Replicon accession: NC_011672
• Strand: +
• Start bp: 1188144
• End bp: 1190307
• Gene Length: 2164 bp
• Protein Length: 647 aa
• GC content: 54%
• Product: predicted protein
• Protein accession: XP_002178381
• Protein GI: 219115171

Plasmid Coverage information

• Num covering plasmid clones: 24
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGACGGAC GGTACAAGAT ACGAATGTGG AACCCTGAAT CTTTCATCGT CACGCGGGTC 
AGAATAGACT CGTGAAAAGT TTCGGTACGT CACATTTCAC TGGGTTTGGT CTGTGCGTGT 
GTGTGCGTGC GTTGTGCGAC ACGTCCAGTC CACTGACAGT GTCGGACTCT CACATACATC 
AAGTGCAGCC ACCGAAAAGA CAATTCCGGA AACGCCGATC GGAACTCGCC GTGATTGTCC 
CGTGTCGTCT GGGGACTAAC AACCGAAACG TTGATGGATG GATGGATGGA TCACAGGAAA 
AAACTCCCTC CTCGTCGTTG ACCTTGCTTG ACTACAGAGA TTCCAACTCG GTGTTCCGTG 
TAGCAGTAAT GTCTACTCGT CCCCGAGTCC TTGTCTGCAG CAACTTTTGC TTCAGCGTTT 
GTCTTTGGTA CGGCATTGGC ACTTGCTGGG GTCGTTTCCT CACCGAAGCA TCGGCATCAG 
CATTTCTCCC TTCTCGAACG GAATGGGGGC ACACTTCCAT TCCCACCAAC GCCCCAACCC 
GTACTGGCAC ACGAAACCAC AACTCCGTAC ATTCGAGACG GCGGCGTTTC CTGCATTCCG 
TCACACCTTT TCAAAACCAC CTTGGTCGTT GGCCTTCCCA CAACGATACC GTGACTGCCC 
GTACCGGTAG CCAATCGCTG CGTGCCGCAC GTACCAATAC ACATATCAAC AACACTGTGA 
AATACAAAAC CTTCGCTTCC AACGTCATCA ATATCAGCAA CAGTACTAAC AGGAATCTAG 
AAATTCTAGT CACTCCCGTC CCATCCTTGG ACAATGGAAA ACTACACACC CGTACTACCG 
GATACAACTC CCGACAAAAA GGCCGTCGCC GAAAGGAAAA CCAGCACCGT TGGCTCAACT 
GGCTGTACCA TCAGTGGTCA ACTACACCGG TAGGACAACT CGAACACGCG GTGCTCAAAC 
AAATGGGACC GGTCATGGCA CACTACGCGA AACGAAAATC GCAACGATCT GCCGACCGCG 
CTCACGCCGT CCTGCAGCGC TACATTCAGG AGCATCAGGC GGGCAACGTC CACGCTCCGC 
TCCATACGGC ACTATTCAAA CCGCCATGGA TGCCTACGCA CAACTCGGGC AACCGGAACC 
AGCACAACAG ATTCTCAAGC AAATGTTGCT GTTGGCGCGA CAATCAACGG CCACGGGAGC 
CGTCACGACG CGACACCGTG CTCTTCAACC CGATGCCGTG TCTTTGGCGA CCATCGCCAC 
GGCATGGGCC AAATCACACC GCGTCGAAGC CGTACCCAAA ACCCTCGCCT TGTTGACGTA 
CATGGAACAG CAGAATCTTG CCACCTCCAA TCACGCTTAC AACATTGCTC TGGCAGCGAT 
TGTCGCCAGT CCGGAACACA ACAGTAGTAA CCGTGGGAAC TACCACAAGG CCGCTCCAGC 
ACAAGCCATC CTCGAACGCA TGCAACAGCG TGCGGCTCAA GGTTATTCAA ATTGTGCTCC 
CGACCTGTAC ACTTACCAAA CGTACATGAC TGCCTTGAGT CATACCCGAC AACGCGACAC 
CCCCGATATC GTCATGGCCG TCTTGGAATT CTTGACCACG CAATCCGACC CCACGTCCCC 
CGCGACAACA CGAGCCCACT TGGCACCGAA CGCACACTGC TACACCGCCG CGATCCACGC 
GTGGGCCTAC AGCAAGGCAC CTCACAAGGC CCGTAACGCC TACGATTTGT TGCAAACGAT 
GCGTCGTCGA CACGAAGTCG ATGGTCGTCT GGATTGTCGG CCGAATGTGG TCGTCTTTAC 
TGCCGTGCTC AATGCTTGCG TCAAGCCCCT GCCAGACGAT CGAGAAACGG CATTTGGCTT 
GGCGCAACTC GTTTACGAAG AATTGCTGCT GTCGGGATAC GGCCCACCGA ACTTTCTCAC 
CTACGCTACT TTTTTGCACG CCATACAGAC GTGTTTGGAC GACGACGATC CGCGTCGGGA 
CGTTGCCGTA CGCCGTCTCT TTGCGGATTG TCGCGACTTT GGACACGTTG GGCACATCGT 
CTTGGATAGA TTGCGGATCG TCGCTTCCAC CTCGTTGTAC GAGGAATTGT TGGAACGTCA 
CGAACGTCAC ATCATACCCT GGTCCTGGTC ACGGAATGTC AAGGGGGAAA GAATCCGAAA 
GTGA 

 

Protein sequence

MDGRPLTVSD SHIHQVQPPK RQFRKRRSEL AVIVPCRLGT NNRNVDGWMD GSQEKTPSSS 
LTLLDYRDSN SVFRVAVMST RPRVLVCSNF CFSVCLWYGI GTCWGRFLTE ASASAFLPSR 
TEWGHTSIPT NAPTRTGTRN HNSVHSRRRR FLHSVTPFQN HLGRWPSHND TVTARTGSQS 
LRAARTNTHI NNTVKYKTFA SNVINISNST NRNLEILVTP VPSLDNGKLH TRTTGYNSRQ 
KGRRRKENQH RWLNWLYHQW STTPVGQLEH AVLKQMGPVM AHYAKRKSQR SADRAHAVLQ 
RYIQEHQAGN ILKQMLLLAR QSTATGAVTT RHRALQPDAV SLATIATAWA KSHRVEAVPK 
TLALLTYMEQ QNLATSNHAY NIALAAIVAS PEHNSSNRGN YHKAAPAQAI LERMQQRAAQ 
GYSNCAPDLY TYQTYMTALS HTRQRDTPDI VMAVLEFLTT QSDPTSPATT RAHLAPNAHC 
YTAAIHAWAY SKAPHKARNA YDLLQTMRRR HEVDGRLDCR PNVVVFTAVL NACVKPLPDD 
RETAFGLAQL VYEELLLSGY GPPNFLTYAT FLHAIQTCLD DDDPRRDVAV RRLFADCRDF 
GHVGHIVLDR LRIVASTSLY EELLERHERH IIPWSWSRNV KGERIRK