Gene PHATRDRAFT_34004 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPHATRDRAFT_34004 
Symbol 
ID7197792 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePhaeodactylum tricornutum CCAP 1055/1 
KingdomEukaryota 
Replicon accessionNC_011672 
Strand
Start bp857575 
End bp858300 
Gene Length726 bp 
Protein Length241 aa 
Translation table 
GC content46% 
IMG OID 
Productpredicted protein 
Protein accessionXP_002178590 
Protein GI219115589 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value0.634785 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTTTCGAA AACTCATCAA GAAAAATGTG GATCGATACT TTTCAGCAGC AAGCAAAGCC 
GACAAGACCA CGCTGATTGT TGCCATCGTG GAAAAGATTC GCCAAAGAGG AGGCCTATTT
GTCAAAAACG ACAACGGAAA GAACTGGTAC GATATTGGAA ATCGCCAGGC TCGAGAAAAA
GTAGGCCATT CTCTCCGAGA TCAGGTTGCG AGTATGGTAA AAAACAAACG GCAAAATCAT
ATGTCCACCA GCGGGAGTCG AGAACATGAT CTTTCACCAA TCCCATTCGA TGTACCTTCC
AGCATCAAGA CTCCAGAGCT TGGCCCACCG TTCAACTCTG GCCTCCAATC TACTGCTGAT
CGCGACTCGC CGACACTCGC CGATACCCAT CGCTTTCTTG CAAACGCTGA GCAAGATTTT
CTGGATCCCA TTCCAATCAC CGATAATTTC TACAACTTGG ACTATGACAC ACGTGTTGAG
TTCCATGTTC CTTGTTGCAG GATGAACAGA CTACAGTCTC CCCACAACAA CATCACTCCT
GCTTCGCGCA GTGGTGTTAG AGAATCAGTT CCTTCCAAAG ATTATTATCT GGCAAATGGA
GACTACCCTT TTAGCCTCCC AAGCTTCAAA CATCCTACAT TCAATTTTTC TGCCATCAAG
GACCTTGAAC CGTTCGACAT CTTCTACAAG CACTCTTCAG TAGGCCACTA CAGCGAAGTT
ATTTAG
 
Protein sequence
MFRKLIKKNV DRYFSAASKA DKTTLIVAIV EKIRQRGGLF VKNDNGKNWY DIGNRQAREK 
VGHSLRDQVA SMVKNKRQNH MSTSGSREHD LSPIPFDVPS SIKTPELGPP FNSGLQSTAD
RDSPTLADTH RFLANAEQDF LDPIPITDNF YNLDYDTRVE FHVPCCRMNR LQSPHNNITP
ASRSGVRESV PSKDYYLANG DYPFSLPSFK HPTFNFSAIK DLEPFDIFYK HSSVGHYSEV
I