Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PHATRDRAFT_34004 |
Symbol | |
ID | 7197792 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
Kingdom | Eukaryota |
Replicon accession | NC_011672 |
Strand | - |
Start bp | 857575 |
End bp | 858300 |
Gene Length | 726 bp |
Protein Length | 241 aa |
Translation table | |
GC content | 46% |
IMG OID | |
Product | predicted protein |
Protein accession | XP_002178590 |
Protein GI | 219115589 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 0.634785 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTTTCGAA AACTCATCAA GAAAAATGTG GATCGATACT TTTCAGCAGC AAGCAAAGCC GACAAGACCA CGCTGATTGT TGCCATCGTG GAAAAGATTC GCCAAAGAGG AGGCCTATTT GTCAAAAACG ACAACGGAAA GAACTGGTAC GATATTGGAA ATCGCCAGGC TCGAGAAAAA GTAGGCCATT CTCTCCGAGA TCAGGTTGCG AGTATGGTAA AAAACAAACG GCAAAATCAT ATGTCCACCA GCGGGAGTCG AGAACATGAT CTTTCACCAA TCCCATTCGA TGTACCTTCC AGCATCAAGA CTCCAGAGCT TGGCCCACCG TTCAACTCTG GCCTCCAATC TACTGCTGAT CGCGACTCGC CGACACTCGC CGATACCCAT CGCTTTCTTG CAAACGCTGA GCAAGATTTT CTGGATCCCA TTCCAATCAC CGATAATTTC TACAACTTGG ACTATGACAC ACGTGTTGAG TTCCATGTTC CTTGTTGCAG GATGAACAGA CTACAGTCTC CCCACAACAA CATCACTCCT GCTTCGCGCA GTGGTGTTAG AGAATCAGTT CCTTCCAAAG ATTATTATCT GGCAAATGGA GACTACCCTT TTAGCCTCCC AAGCTTCAAA CATCCTACAT TCAATTTTTC TGCCATCAAG GACCTTGAAC CGTTCGACAT CTTCTACAAG CACTCTTCAG TAGGCCACTA CAGCGAAGTT ATTTAG
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Protein sequence | MFRKLIKKNV DRYFSAASKA DKTTLIVAIV EKIRQRGGLF VKNDNGKNWY DIGNRQAREK VGHSLRDQVA SMVKNKRQNH MSTSGSREHD LSPIPFDVPS SIKTPELGPP FNSGLQSTAD RDSPTLADTH RFLANAEQDF LDPIPITDNF YNLDYDTRVE FHVPCCRMNR LQSPHNNITP ASRSGVRESV PSKDYYLANG DYPFSLPSFK HPTFNFSAIK DLEPFDIFYK HSSVGHYSEV I
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