Gene PHATRDRAFT_33874 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPHATRDRAFT_33874 
Symbol 
ID7197887 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePhaeodactylum tricornutum CCAP 1055/1 
KingdomEukaryota 
Replicon accessionNC_011672 
Strand
Start bp551503 
End bp552312 
Gene Length810 bp 
Protein Length269 aa 
Translation table 
GC content50% 
IMG OID 
Productpredicted protein 
Protein accessionXP_002178533 
Protein GI219115475 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value0.994643 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCGCCAC AAGAGGCCAA TGCAATCGAC GACAGGGAGC AAACTCACCC CGACGAGACT 
GAAGCGTTCC TCGCCGCGCG CCTAGTGGAG TTTGACAAGG AAGTAGCACT GCTCACAGAA
CAAGAAACAA AATTTTTGCG ACAGGCGCAA GCCAATTGTT CCGAATTGCT GGACCAGAAT
TTCAAGCTCA TGTTTCTGCG TACTGACGTT TTCAATGTCC AGCTGGCCGC GAAGCGATAC
GCAAGTTACT GGGAGCACCG GGTCGGCTTG TTTGGACCTG AGAAAGCATT CCTCCCGATG
ACGTTGGACG GGGCCATGAA GGACGACTTG GAAACGTTAG CGCTCGGCTA CACTCGCACT
GTTCAGGATC ACGGGCGAAT ACTTTTCATG GATCCGTCAC GCACGCTAGT GGATCGTGAT
ATTGACAGCA TCGTTCGTTG CCAATGGTAT GTTTCGACGA AAGCTCTTAT GAGCGAACCG
GAAATGCAAA AGAAAGGAGC TATTTTCGTT CTCGATCTGG ATACGATACG GCACGTTGAC
CGCCCTTTGA TCAAACGTAT GGCGGAGACC ACCAACGATA GCTTTCCTCT ACGTGTCTCT
CTCTGTTGTA TGATCAACCC CCCTCCTTTG ACCGACTTTT TCGTCAAAAT CGTCAAGCTT
TTCATGAAGC CCAAAGTGCG ACAGAGGTTA TACGTGATTA AAGGTGACCA AAAGCTTGTC
AAGCATGTGG AAGGACTGGA TATGAAAACG CTGTACACAG CTTTAGATCA CGACAAATGG
ATCGAAACGA TGCGTGAAAA GGAAGGCTAA
 
Protein sequence
MAPQEANAID DREQTHPDET EAFLAARLVE FDKEVALLTE QETKFLRQAQ ANCSELLDQN 
FKLMFLRTDV FNVQLAAKRY ASYWEHRVGL FGPEKAFLPM TLDGAMKDDL ETLALGYTRT
VQDHGRILFM DPSRTLVDRD IDSIVRCQWY VSTKALMSEP EMQKKGAIFV LDLDTIRHVD
RPLIKRMAET TNDSFPLRVS LCCMINPPPL TDFFVKIVKL FMKPKVRQRL YVIKGDQKLV
KHVEGLDMKT LYTALDHDKW IETMREKEG