Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PHATRDRAFT_33867 |
Symbol | |
ID | 7197675 |
Type | CDS |
Is gene spliced | Yes |
Is pseudo gene | No |
Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
Kingdom | Eukaryota |
Replicon accession | NC_011672 |
Strand | + |
Start bp | 537301 |
End bp | 538509 |
Gene Length | 1209 bp |
Protein Length | 342 aa |
Translation table | |
GC content | 50% |
IMG OID | |
Product | predicted protein |
Protein accession | XP_002178247 |
Protein GI | 219114903 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 0.17062 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTCTCGAT CGCTTTTTTA CGTTGATTCT CACTGCCGGC AAAGTTGTCG GTCGTCCTTC ACCGCATCTT TATTCTCACT TCTCGCGTTC ACAGCTTTTT TGAAGATGGC AAAACAGTTT CAGCATGTTG TACGGAGAAC TGCGGGAACA AGATAGATGG CGGCATCCAG GGATTCTTCT ATTCCCTAGG AGCCTTTGTT GGTTCCAAGC CTCGTCAAAC GATTGGAATG GCGATTCTTT TCACGGTCGT TTGCGGAGCC GGTTTCGTGC GCTTCGAAAC AGAAAGCCGC GGCGAAGAGC TCTGGGTTCC GCAAGATACA CGGGCCGAGC AAGAAACGCT CATGTATGAA TCCTATTTTA ACAGTTCTAC TCGTTTTAAT ACTATGATTG TTCAGGCTGC AAATCCGGGG GGCGACGTTC TCACGAAGGA GATCTTGTTG GAATCAATGC TCATGCATAG CGAAATTGCC ACAAAACAAG CTAAGCTGGA CGGCATTGAC TATGGGCTCT TGCAGCTGTG TGTAAAGTCT GGAGGAACCT GTGTGTCCAG CACGGAAGGT GCTTGTCAAT GCTTGATGAC GAGTATTTTG CGCCAGTGGA ACTATGACTT GGCAACCTTG CACCAGGACA ATGACCGAAA TTTACGCTTC TCGCCAGTCT CTGGTCGAGC TTGACCAGCG CCTAACGGGT CTCTCAACAG TACCTCCTTT CATTGCCGAG CCTGTTTCAG AAGATGCGTA CCGCAATGTT ATGGCTGGCC TTTTCAACTT TTTGAGCACG TCGGGTTCGA ATGATATTGG CAACGTGACC CTAGGTGGTG ATAATTGGCC GACTACAGAA GCCGATTTTG TTGCCACGGT GGCGGCCTTT GCAAGCAGTT CGGGGCCCGG ATCAATTTAT GATCGTGATG TTACCTTCTC GCAAGATGGA TCGCAGATTG AAGCGTTTCG TGTGGAGCTC GAATATGTTC GGCTGACTAA GGAGAACCGC GGAGAATTGA TTGACGACGC TGCCCGCCAG ATTGACGCCA TGGATAGTAC CCGCGATATG GTCAATAGTT GGGACGACCT ACCGACCGCG TTCGCCTACT CTTCCAAGTT CATCACGATT GAGGGTTTTA AAATTATTCA ACTTGAACTT TTCCAGATCG TTGGGTTGGC AATTGCAGCC GTCGGCGTGA TAGTTTGCTC ACCGTTCCCA GTCCAATGA
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Protein sequence | MSRSLFYVDS HCRQSCRFFE DGKTVSACCT ENCGNKIDGG IQGFFYSLGA FVGSKPRQTI GMAILFTVVC GAGFVRFETE SRGEELWVPQ DTRAEQETLM YESYFNSSTR FNTMIVQAAN PGGDVLTKEI LLESMLMHSE IATKQAKLDG IDYGLLQLCS LVELDQRLTG LSTVPPFIAE PVSEDAYRNV MAGLFNFLST SGSNDIGNVT LGGDNWPTTE ADFVATVAAF ASSSGPGSIY DRDVTFSQDG SQIEAFRVEL EYVRLTKENR GELIDDAARQ IDAMDSTRDM VNSWDDLPTA FAYSSKFITI EGFKIIQLEL FQIVGLAIAA VGVIVCSPFP VQ
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