Gene PHATRDRAFT_33845 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPHATRDRAFT_33845 
Symbol 
ID7197876 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePhaeodactylum tricornutum CCAP 1055/1 
KingdomEukaryota 
Replicon accessionNC_011672 
Strand
Start bp487774 
End bp488721 
Gene Length948 bp 
Protein Length315 aa 
Translation table 
GC content59% 
IMG OID 
Productpredicted protein 
Protein accessionXP_002178234 
Protein GI219114877 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.420782 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACGAGAT TCCGAAAACA GTTACTACAT GTACTCCTGT TGTCCTTTGC CGTTCGAACG 
ACGAGCTTTG CTCCTCGTCC GCGGCCGCGC TTGCTATTGC AGCCCGCCAG CCCCACCGGC
GCAGCTCCAC CGGCCTTGTG CGTGCCGAAA TCCGAATCCT GGCGTATCTC GACCACACGA
GCCGCTTCGA CGACGTCCAA ATCTTCCACC GATCCTCCTC ACCAAGACCC CTCACCATCC
TTTTCCATCA ATATCGTTCC CGCCGTGGCG TGGATTGGTC TCGTCACTTG GCTCTTCACC
GGCGCCCCGG GACAGTTCGG TGACCCCCAC GACGCCGCCT TGCTGCAACG CATACTCGCC
GATCCGGTAC ATCCCCAGAT TAACGAACTC TTCTTTACCA TTTTCAATCT CTTTGCCGTC
ATGCCCGTTA TCCTCGCGGC GGTGGCGCTG CCGCAGGCCC CCCGTCGCGG TCTGCCGCCC
ACGCCGTTTC TCCTCCTCAG CGTCGCCGTC GGCTACTTTG CCGCCGGACC GTACTTTGCA
TTCCGGCCAC CGTTGCCTGT GCAACGCACG GACGGTGACA ACGAACTGGG ATGGTTCACT
CGGAATGTTC TAGAAAACAG AGTCGTCGGG ATCGGTACCT TCGTATCGAC CGTTTTCTTT
TTCTACGCCG GCAACGTCGG GGGTGTCCTG CAACAAGGCG GGGGAGACAG TCTCTGGCAA
GACTTTGTTA CCCTCCTCCA GACCAGTATG TTTGCCAACG TGGCGTGTTT GGACCTGACG
TTGCTCCATT GTACCATTAC GGCACTGATT CCTAAAGATT ACGCGTTGCG CAACCCCGAC
GCCGATCCGC GAGACGCCCT CCGCATCGCG GCGGCCACGG CATTCTTTCC TTTTCTCGGG
AGCTCCTTGT ACCTAGCCTT GCGGCCGTCG CTGCCCGAGA CGGAATAA
 
Protein sequence
MTRFRKQLLH VLLLSFAVRT TSFAPRPRPR LLLQPASPTG AAPPALCVPK SESWRISTTR 
AASTTSKSST DPPHQDPSPS FSINIVPAVA WIGLVTWLFT GAPGQFGDPH DAALLQRILA
DPVHPQINEL FFTIFNLFAV MPVILAAVAL PQAPRRGLPP TPFLLLSVAV GYFAAGPYFA
FRPPLPVQRT DGDNELGWFT RNVLENRVVG IGTFVSTVFF FYAGNVGGVL QQGGGDSLWQ
DFVTLLQTSM FANVACLDLT LLHCTITALI PKDYALRNPD ADPRDALRIA AATAFFPFLG
SSLYLALRPS LPETE