Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PHATRDRAFT_33845 |
Symbol | |
ID | 7197876 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
Kingdom | Eukaryota |
Replicon accession | NC_011672 |
Strand | + |
Start bp | 487774 |
End bp | 488721 |
Gene Length | 948 bp |
Protein Length | 315 aa |
Translation table | |
GC content | 59% |
IMG OID | |
Product | predicted protein |
Protein accession | XP_002178234 |
Protein GI | 219114877 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 0.420782 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACGAGAT TCCGAAAACA GTTACTACAT GTACTCCTGT TGTCCTTTGC CGTTCGAACG ACGAGCTTTG CTCCTCGTCC GCGGCCGCGC TTGCTATTGC AGCCCGCCAG CCCCACCGGC GCAGCTCCAC CGGCCTTGTG CGTGCCGAAA TCCGAATCCT GGCGTATCTC GACCACACGA GCCGCTTCGA CGACGTCCAA ATCTTCCACC GATCCTCCTC ACCAAGACCC CTCACCATCC TTTTCCATCA ATATCGTTCC CGCCGTGGCG TGGATTGGTC TCGTCACTTG GCTCTTCACC GGCGCCCCGG GACAGTTCGG TGACCCCCAC GACGCCGCCT TGCTGCAACG CATACTCGCC GATCCGGTAC ATCCCCAGAT TAACGAACTC TTCTTTACCA TTTTCAATCT CTTTGCCGTC ATGCCCGTTA TCCTCGCGGC GGTGGCGCTG CCGCAGGCCC CCCGTCGCGG TCTGCCGCCC ACGCCGTTTC TCCTCCTCAG CGTCGCCGTC GGCTACTTTG CCGCCGGACC GTACTTTGCA TTCCGGCCAC CGTTGCCTGT GCAACGCACG GACGGTGACA ACGAACTGGG ATGGTTCACT CGGAATGTTC TAGAAAACAG AGTCGTCGGG ATCGGTACCT TCGTATCGAC CGTTTTCTTT TTCTACGCCG GCAACGTCGG GGGTGTCCTG CAACAAGGCG GGGGAGACAG TCTCTGGCAA GACTTTGTTA CCCTCCTCCA GACCAGTATG TTTGCCAACG TGGCGTGTTT GGACCTGACG TTGCTCCATT GTACCATTAC GGCACTGATT CCTAAAGATT ACGCGTTGCG CAACCCCGAC GCCGATCCGC GAGACGCCCT CCGCATCGCG GCGGCCACGG CATTCTTTCC TTTTCTCGGG AGCTCCTTGT ACCTAGCCTT GCGGCCGTCG CTGCCCGAGA CGGAATAA
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Protein sequence | MTRFRKQLLH VLLLSFAVRT TSFAPRPRPR LLLQPASPTG AAPPALCVPK SESWRISTTR AASTTSKSST DPPHQDPSPS FSINIVPAVA WIGLVTWLFT GAPGQFGDPH DAALLQRILA DPVHPQINEL FFTIFNLFAV MPVILAAVAL PQAPRRGLPP TPFLLLSVAV GYFAAGPYFA FRPPLPVQRT DGDNELGWFT RNVLENRVVG IGTFVSTVFF FYAGNVGGVL QQGGGDSLWQ DFVTLLQTSM FANVACLDLT LLHCTITALI PKDYALRNPD ADPRDALRIA AATAFFPFLG SSLYLALRPS LPETE
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