Gene PHATRDRAFT_33839 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPHATRDRAFT_33839 
SymbolPGAM_6 
ID7197873 
TypeCDS 
Is gene splicedYes 
Is pseudo geneNo 
Organism namePhaeodactylum tricornutum CCAP 1055/1 
KingdomEukaryota 
Replicon accessionNC_011672 
Strand
Start bp469016 
End bp470065 
Gene Length1050 bp 
Protein Length282 aa 
Translation table 
GC content51% 
IMG OID 
Productpredicted protein 
Protein accessionXP_002178519 
Protein GI219115447 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTTTGCTG TTTCACGTTC CAGCTTTCTC CTCGCCACTC GGGTTAAAAC TCTGCGCAGG 
TATGTTTACG GATCCGTATT CACTCAGTAT CTTTTTTGTT GAAAGATTCG AGGAACCGCT
AATCCTTTTC GGGCTAGCCA AATGTCTGTT CTCATATCTA ATGCAAGTCT TGGCCCCTGC
TGTTATAACG GAGTGTACCA TTTGCGAACT GTTGCTATTC TAAAAGGGTT CACTTGATCT
CATTATTGCT ATTGTTTTAG CTTTGCTGCC GTACAGGCTG CCGACAAGCA CACGCTCGTC
CTCGTGCGTC ATGGGGAGTC TACATGGAAC CTCGAGAACA AATTCACTGG ATGGTACGAC
TGCCCCCTCA GTCCCAAGGG ACATGAAGAG GTTATTGAGG CCGGTCAGTT GATCAAGAAG
GAAGGAATCA AGGCCGACAT AGCGTTCACA TCGCTGCTAC AGCGTGCGAT ACGCTCGATG
TGGCACGTTA TGGAACAGAC GGATCTTATG TGGATCCCAG TCAAGAAGGC ATGGGAGCTC
AACGAACGGC ATTATGGAGC TCTGCAAGGG CTGGACAAGC AGGAGACTGT TGACAAGTAC
GGCAAGGATC AAGTGTTGGT CTGGCGACGT TCCTACGACG TTCCCCCGCC GACGGTCGAC
AAGACGAGTG AGCACCATCC TGCCAATGAT CCGCGGTACA ATGGCTTTGA CTTTCCGGAT
GAGTTCACCG AGTCTCTGGC GACTACTCTT GAACGCGTTG TACCATTTTG GAACAAGGAG
ATCGTCCCTG AGTTAAAGGC GGGCAAAACT GTTATGGTCG CTGCTCACGG GAATTCGCTG
CGTGCCCTCG TCAAGCATCT TGACGGCATT GACGAGTCCG AAATTTCCGA ACTCAATATC
CCTACTGGTA CCCCTCTAGT TTACGAACTT GACGAAGACT TTAAGCCGAT CCCTCAGGAC
GGTGCCATTG CTCCCTTACA GGGACGTTAC CTTGGAGATC AGGATGCTAT TCGCGCCCGA
ATCGAGGGTG TTAAGAACCA GACTAAGTAG
 
Protein sequence
MFAVSRSSFL LATRVKTLRS FAAVQAADKH TLVLVRHGES TWNLENKFTG WYDCPLSPKG 
HEEVIEAGQL IKKEGIKADI AFTSLLQRAI RSMWHVMEQT DLMWIPVKKA WELNERHYGA
LQGLDKQETV DKYGKDQVLV WRRSYDVPPP TVDKTSEHHP ANDPRYNGFD FPDEFTESLA
TTLERVVPFW NKEIVPELKA GKTVMVAAHG NSLRALVKHL DGIDESEISE LNIPTGTPLV
YELDEDFKPI PQDGAIAPLQ GRYLGDQDAI RARIEGVKNQ TK