Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PHATRDRAFT_32851 |
Symbol | |
ID | 7197327 |
Type | CDS |
Is gene spliced | Yes |
Is pseudo gene | No |
Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
Kingdom | Eukaryota |
Replicon accession | NC_011670 |
Strand | + |
Start bp | 941409 |
End bp | 942375 |
Gene Length | 967 bp |
Protein Length | 309 aa |
Translation table | |
GC content | 50% |
IMG OID | |
Product | predicted protein |
Protein accession | XP_002177722 |
Protein GI | 219111941 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.0274971 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGACGCATC TTTACGCGCG AAAGAAGGTT CAGATCGACC ATGATGAAGA AACAGATACC CCTGATCGAC CAAGTCACCC ATCCCCGTCA TCGCGCTTGA CACCCTCCAA GAGCAAGGAT AGGGGACGGA AAGGATCTAG CGAGCTTGGA TGGGCATTAG TGGCCGTGGT CGGTTTCATC TTTCTCGGTT TATTTCTTGG CTATGTCCTT TTGCACAATC AGCATCGTAC CGTAATTTCA CATGTGTTGA AGGATCCGTG GGGACACGGA GGGGGTGTTC TGCGAGGCCG CGCAGGCTTT CGACATCATT TTTACACCGG TTCTCCCCGT TACGTGACCG TCGTGATGCC CTCGGTGGTG AATCAAAAGG GACGAATGGA TCGCTTAGAA GCGATACAAG ATACCTGGGG GCCGGGGGCG AGATCAATTT TTGTTGTTCA CAACATTTCC GAGTTTCCCC AGGCCTCACA TGCGGTCGTG TCAGAAGAGT CTCTACCGGA GGATCCTTAC GCATACCCAC AATTACTCCT AGTGCCGCCA GGAATTGGTT TCAATGATGG ACTGCCCAGG CTATATCATA CAATTCGGAC GGTCTTTGAG AAAGTGGACC CAGATTTTGC GTTTTTCGTG AATGATCACA CCTTCGTTAT TCCGGAACAT CTCTGTAAGT ATTTGAAGGA TCGTAGTCCG AACGAAGATC TATATGCTGG GCACGCCATG AAAAATGGAA AGCTAGTGTT TAACTCTGGC GCAGCTGGTT ACGTACTGTC TCGAAGTACT ATGCGAAAAA TGATGAACAC ATGGGATGAA CGCGATCCCG ATTGTTGGGT GGATCCAGAA GCCGCCACTT CTTGGTTACA GGGCAATCCT GGATTGGCAA CCGTGCAGTG CTTAGAAAGT ATGGGTATCA AAGCGTTCGA TACTCGAGCC GATAGTAAGT GGCATCGTTT TCACGCATTT CCTTTGA
|
Protein sequence | MTHLYARKKV QIDHDEETDT PDRPSHPSPS SRLTPSKSKD RGRKGSSELG WALVAVVGFI FLGLFLGYVL LHNQHRTVIS HVLKDPWGHG GGVLRGRAGF RHHFYTGSPR YVTVVMPSVV NQKGRMDRLE AIQDTWGPGA RSIFVVHNIS EFPQASHAVV SEESLPEDPY AYPQLLLVPP GIGFNDGLPR LYHTIRTVFE KVDPDFAFFV NDHTFVIPEH LCKYLKDRSP NEDLYAGHAM KNGKLVFNSG AAGYVLSRST MRKMMNTWDE RDPDCWVDPE AATSWLQGNP GLATVQCLEI SGIVFTHFL
|
| |