Gene PHATRDRAFT_32656 details

Gene Information

• Locus tag: PHATRDRAFT_32656
• ID: 7197447
• Type: CDS
• Is gene spliced: Yes
• Is pseudo gene: No
• Organism name: Phaeodactylum tricornutum CCAP 1055/1
• Kingdom: Eukaryota
• Replicon accession: NC_011670
• Strand: -
• Start bp: 473989
• End bp: 476166
• Gene Length: 2178 bp
• Protein Length: 644 aa
• GC content: 55%
• Product: predicted protein
• Protein accession: XP_002177942
• Protein GI: 219112381

Plasmid Coverage information

• Num covering plasmid clones: 21
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGATCCGG GCCTCCCAAC CGGTCCCCCC TTTCGTTTCA TCGTTCCCCA CGGGACGGGC 
CATGGCGAAG TAATCCCATA TCCACAACGA ATTCGTCCCT CGCATTTTTT CCTAGCTTTT 
GCCCGACAGG CACTGGAAGG CAACCGTCTC TTGCCGTAGT ACGGTGGTGT GTACCAATCT 
TCACACAACT ACACAAATAC AACACACCCG CACATCCACG CGCACTGCTA ACTGTAAACG 
GGGTACGGAC ACTGCGTGAA GCATTCGTCG TCATTGTCCC AGCGGTACCG CTACCGCAAT 
GATGGACATC CTTCCCGACG CACCCGACGT GATTGTTCCG GTTCCACCGA GACCTTTACA 
ACAGCCCCAC CCGCATCGAC AAGGTTGCGA CACATTTACT GTTAATCCTG TCCCAAGAAC 
GAATGCGTGT GGTGCCGTGA GTGACGTTCG GGAATCGACG GCGCGTCGGG GACGATCGTT 
GGGACGTCTG CCGAATCTAC ACGTTTGGAT CTTGGTGCTG GCCGTAGCTC TCGTGGCGGC 
TGTCCTAGTC CAGTGGAGCG AATCGTTGTC GTCTTCCACG AGTCTTTCCC TGGACACCCC 
CGAGGTTTCC CCGTTCCGAT GGCTTCTAAA AGGGGACGAT TCCCGTTCCC CACACAGCCA 
ACACAAACCT ATTTACGACG AGGCGCACCC CGCACTCTTT CCCTTGTCCC GCAGCGATCA 
AATTGGCTTT TTCCTCGCCA CGCTCGGTCT CATGGTGGCG GCTGGTGGCG GCATTGGTGG 
AGGTGGGATC CTCGTACCCG TGTACATTCT AGTCATGGGC TTTACCCCTA AACACGCCAT 
TCCCTTATCC AACGTTACCG TATTGGGCGG AGCCGTCGCC AATACGATCC TCAATGCCCG 
CAAACGACAT CCCCTCGCGG ATCGACCCCT CGTGGACTGG GATCTCATCC TCGTTATGGA 
ACCCCTCACC ATTGCCGGAG CCCTGCTCGG TGCCTTTCTC AACAAAGTTC TGCCGGAGTT 
GTTACTCACC GTACTACTCG TACTCCTCTT GTCCGTCACG GCTTACACTA GTTTGACCAA 
GGCGTTGAAA CTTTACGCCC GGGAAAGTCG CGCCATGGCC GCCGCTCAAG GACTCGTACG 
GGTCGACGGA ACCAAGGAAT CGGAACTTAC CGTCATGGCA CGATTGGAAG ATCAAGACGA 
CCACGACGAA GCTGCCGAAG TACTTTTGGA AAATATGGAA CGAGACGATG ACGACGACGA 
ATCTAGTTCC GACGACGATA TGAAGAGCGT GGAGTTGCCC GCGTCGTCCT TGCAAGCCGA 
ACTGGACCAG CTGTTGGAAG AAGAGTGCAC GACGCCCATG GCCAATATAT CGATCCTGGT 
AACCATGTTC ATCGTCGTTC TCACGATCAA CGTACTCAAA GGCGGTGGCG CCTTTCCCAG 
TCCTCTCGGT ATTCGTTGCG GATCTCGAGC CTTCTGGATC GCCAACCTGG TCATGCTCGC 
TTGGATTGGG ATCATTAGCG TGGGCATCCG AGCCTACCTG GTCCGACGAT TTGAACAAAA 
GCGACGCCTC AGCTTTCCCT ACGTCGAAGG CGATATTCGA TGGGACGCAC GAGCTACCAT 
TGTCTATCCG GTGGTGTGCT GCATGGCCGG ATTCTTTGCT GGAATGTTTG GGGTGGTACG 
TAAACGTCCA ATCCTGTAGG GAGACCCTCG CCGCGACGTT AGCGTATCAT ACCACCAGCT 
CGCCTAGCCG CAGAACAAAT CTAGTATCGA TGCTCACACG CGTACTCTCT CTCTCTCTCT 
TCTCTTCCCA CACAGGGCGG CGGGATTGTC AAGGGACCAC TCATGCTGGC CATGGGCGTT 
CATCCGGCCG TTTCGTCCGC GTCCTCTGCT TGCATGATTC TATTCACTTC TTTTACAGCC 
ACGACGAGTT TTGTTGTTTT CGGACTCCTC GTCTGGGACT ACGCGTACGT CTGCATGGCT 
ATCGGTTTTG TGGCCACTTT CGCCGGCCAA GTGGGGCTGT CCTATCTCAT GAGGCGTGCC 
CAACGTAATT CGTACATTGC CTTTTCTATT GGAGCCGTGG TGTTGCTGTC GGCCTTTCTT 
ATGACCATAC AATCCCTACT GAGCATGGCA GCGGGAGAAA AACACCACTC GGGAGGAATT 
TGTGGCAAGG GAGACTAG 

 

Protein sequence

MDPGLPTGPP FRFIVPHGTG HGEVIPYPQR IRPSHFFLAF ARQALEGNRL LPYIRRHCPS 
GTATAMMDIL PDAPDVIVPV PPRPLQQPHP HRQGCDTFTV NPVPRTNACG AVSDVRESTA 
RRGRSLGRLP NLHVWILVLA VALVAAVLVQ WSESLSSSTS LSLDTPEVSP FRWLLKGDDS 
RSPHSQHKPI YDEAHPALFP LSRSDQIGFF LATLGLMVAA GGGIGGGGIL VPVYILVMGF 
TPKHAIPLSN VTVLGGAVAN TILNARKRHP LADRPLVDWD LILVMEPLTI AGALLGAFLN 
KVLPELLLTV LLVLLLSVTA YTSLTKALKL YARESRAMAA AQGLVRVDGT KESELTVMAR 
LEDQDDHDEA AEVLLENMER DDDDDESSSD DDMKSVELPA SSLQAELDQL LEEECTTPMA 
NISILVTMFI VVLTINVLKG GGAFPSPLGI RCGSRAFWIA NLVMLAWIGI ISVGIRAYLV 
RRFEQKRRLS FPYVEGDIRW DARATIVYPV VCCMAGFFAG MFGVGGGIVK GPLMLAMGVH 
PAVSSASSAC MILFTSFTAT TSFVVFGLLV WDYAYVCMAI GFVATFAGQV GLSYLMRRAQ 
RNSYIAFSIG AVVLLSAFLM TIQSLLSMAA GEKHHSGGIC GKGD