Gene PHATRDRAFT_32553 details

Gene Information

• Locus tag: PHATRDRAFT_32553
• ID: 7197106
• Type: CDS
• Is gene spliced: Yes
• Is pseudo gene: No
• Organism name: Phaeodactylum tricornutum CCAP 1055/1
• Kingdom: Eukaryota
• Replicon accession: NC_011670
• Strand: +
• Start bp: 233301
• End bp: 233934
• Gene Length: 634 bp
• Protein Length: 148 aa
• GC content: 52%
• Product: predicted protein
• Protein accession: XP_002177580
• Protein GI: 219111657

Plasmid Coverage information

• Num covering plasmid clones: 12
• Plasmid unclonability p-value: 0.0017296
• Plasmid hitchhiking: No
• Plasmid clonability: decreased coverage

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGTCCCCGT CTGCCGATTT CACCATCTCC GACTTTCCTC ACAAAGTCCT TGATCCAATC 
GCCACCGACA CCATTGCTCC CTCCTATGCG TCGCTTCTCC TGGCCCAACG CCAGCTCAGC 
GCCAACACAT CTGCCATTCC CAGCCTCAAC GGCGGCGGCG CTCATGGCCA CATGGCTCTG 
ACGCTCACCG CCGCCGCATA CGCCGAACTG TCCGACGTCC CCTTCGTCAT CCCCGTTGCT 
CCCATTGCCG ACCCCGAACC GGGTACCACG CAACCCCAAA TTACGGAGAA CAATCGACTC 
CACAAACACG CTGTGGCCAT CCACAGCCTT TATGTGGCCG TCAACAATGC CCTCCGACGC 
CAAATCCTTG ACGCCGTTCC TCGCGTCTAC GTCCGCGACT TAGAGCACCC CCAGTTCGCG 
TACAGCCACG TCACCTGCCT TGACCTGCTG GACCATCTCT GGCGCAACTT CGGNNNNNNN 
NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNAGAGTAC AATGTAGACT 
CATAATCTTC GTAGTTCATT GTTTTCCTGA CTTCGATCTC CATCGTCGTT TTGTGTTCAT 
CAATAGTGTT TTCCGTTCTC GGCGGATGGA ATGA 

 

Protein sequence

MSPSADFTIS DFPHKVLDPI ATDTIAPSYA SLLLAQRQLS ANTSAIPSLN GGGAHGHMAL 
TLTAAAYAEL SDVPFVIPVA PIADPEPGTT QPQITENNRL HKHAVAIHSL YVAVNNALRR 
QILDAVPRVY VRDLEHPQFA VFRSRRME