| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PHATRDRAFT_32315 |
|---|
| Symbol | |
|---|
| ID | 7196913 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
|---|
| Kingdom | Eukaryota |
|---|
| Replicon accession | NC_011669 |
|---|
| Strand | + |
|---|
| Start bp | 2186539 |
|---|
| End bp | 2187591 |
|---|
| Gene Length | 1053 bp |
|---|
| Protein Length | 350 aa |
|---|
| Translation table | |
|---|
| GC content | 48% |
|---|
| IMG OID | |
|---|
| Product | predicted protein |
|---|
| Protein accession | XP_002176927 |
|---|
| Protein GI | 219110351 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 0.0888066 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTCTGGTT TGCTGATTGC TGCTTTGATC TTCTTTATTT TCGGCGGATC GGCACAATAC
GACGAGCATG AGTCAGCCCA GTTATTCGCT TTGGCTGTGA CAAGTACAGT GTCATCCCTA
CGGGGGTCTG AAGAAATGTC TAAGAATCGA AATCCGCTTC TCTCCGTTGA GCCCTTGAAG
TATTCGCTTC ATCCCGACTG GAAACTATGG TCAGAAATGG AAGGCAGCGA ACAGCAACAG
GCTTTAGATC GTGTAGGTGT CTATTTGAAA AAATATGGGG ACATGATTGG CCACAAGAAA
AAAATTAAGA AGCATGGAAC ATGCGATCTG ATTAACATCG GTCTCAACAT TGAGGGGGAC
CATAACCTTT GCGGCCCGGC ACCGCCCAAG CCTTGTAATT TTATTTCGTT CGGCATCAAT
GACGATCCTT CCTTTGATCG TATCCTGGCA GATAGATGGG GCTGCCGAGG CTTTGCCGGG
GATCCGACGG TTGAGCATCC GTCAAAACTT CACCCGCTAG TAACCTTCCA TAACGTCGGA
GCCACGTTGC TGATGAATAA TGAAGAACGA GAAGTCGACA AGGGTGGTGC TGAGGACTGG
TGGTTGGTCA GTATGCCCAA GATGCGGTTT TTCCTTGGAC TTAAACACAT TGATATCATC
AAACTAGACT GTGAAGGCTG CGAAGTAGCT TTTGCCCGCG ATATTCTCCG CGAAGATCCG
TCATACTTGC ACCACGTTGA CCAGTTGTCG ATTGAGACGC ACGTCACGCG GACTTGGTTG
GATTCGCGCG AGCATGTTTA CTATTTTGGA TTGCACTTTG CTCTTCTCGA AGAAGCGGGC
TTCGTCTTGG AATGGTCTAA TGTATTTGGA TGTAGCAAAC GCCATGAGGT CACTGGGTGC
ATGCCAGAAC TGGAACAGTA CGGATTTCCT TGCGGGTACA AGCCGTGGCC AGCGCATCCG
AATGTAGTTA TTGGTGTATC TTGTCAAGAT TTTTTGTGGA AACGCTATCC CGAAAAGGCA
AGTGGATCCT TCTCAATTAC AAAGTCATTG TAG
|
|---|
| Protein sequence | MSGLLIAALI FFIFGGSAQY DEHESAQLFA LAVTSTVSSL RGSEEMSKNR NPLLSVEPLK
YSLHPDWKLW SEMEGSEQQQ ALDRVGVYLK KYGDMIGHKK KIKKHGTCDL INIGLNIEGD
HNLCGPAPPK PCNFISFGIN DDPSFDRILA DRWGCRGFAG DPTVEHPSKL HPLVTFHNVG
ATLLMNNEER EVDKGGAEDW WLVSMPKMRF FLGLKHIDII KLDCEGCEVA FARDILREDP
SYLHHVDQLS IETHVTRTWL DSREHVYYFG LHFALLEEAG FVLEWSNVFG CSKRHEVTGC
MPELEQYGFP CGYKPWPAHP NVVIGVSCQD FLWKRYPEKA SGSFSITKSL
|
|---|
| |