Gene PHATRDRAFT_32290 details

Gene Information

• Locus tag: PHATRDRAFT_32290
• ID: 7196900
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Phaeodactylum tricornutum CCAP 1055/1
• Kingdom: Eukaryota
• Replicon accession: NC_011669
• Strand: +
• Start bp: 2128154
• End bp: 2130208
• Gene Length: 2055 bp
• Protein Length: 684 aa
• GC content: 48%
• Product: predicted protein
• Protein accession: XP_002176916
• Protein GI: 219110329

Plasmid Coverage information

• Num covering plasmid clones: 25
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGCCACGAC AAATTCGCAC CTGTGTTGTG TGTCAACGAC GATTTTTGGC TCCCACTCTG 
CACATAACGC ATTGTGCTGC CTGTCTCGCC GTACAAAATA GTCCCACAGT CTCCATGGAG 
ACTAGTTCTA GACGGCATCT GGATCTTCCG AAGGATGGAA CTCCACCGGA GTTCCAAGTT 
GATGACGCAC CGGCTAGTGA ATGCAAAGAG GAGACGGGAC GATCATCTCG GCCCGCAAAG 
CGTCCGAAAG CGGCTGGTGA ACTGACAGTG AATGCAAGAA CGCTATCGAA TGAGTATCTG 
AATCCTTCTT GTATTTCCTT TCAACAACGA ACGCAGACTA TGCAACCGAT CCATCTAGAT 
CACGTTGACC AAGTACAAAC CGTCGATAAG GAAGCTTCTG TCGAGAAAAT TGACGACAGT 
GACGACGAGG AAATGGGCAG CGAAGCCGGA GACGAACTTC GATGCATACA AATCGTGGAT 
CTGTTGAGCG ATTGTATTGA CGAAAATGAT GAACCTGATT CCGAGGATGA ATGGGCGGAA 
GACGTACCTC TTCACGCTCT GGTACCCGCC AACCCACGTT TACCGCTCGG CATGAAACCA 
ACGAAGTCCA AGAATCCATT GACAACGCAT GTAAAGCCAG AGCTGATGTC AGGCGATGGA 
AGTAAAGCGT TACGACCAGT AAACGATGAT GGCGATGGTT TTGACGAGGA TTACTGCCGG 
ATCATCAATA CTTTCAGTAA CGACAAAAAC GGCGATGCTG ACACTTCCAT GACCTGTATG 
ATGTGTGGCA AATCTCTGCA GCACCTCAAG ACAGGCATCA AAGGTCGTCT TACTCATATC 
AAACGGTGTT CCAAAAAGTA CGGCGTCACG GCGCGAGACA TTCGGCTGGA CGACGACCAC 
GAAGTTTTTG CCATGAACCA AAAGTCTGCC TTATCACCAA CGACAAAACT CGCAGCTCGG 
TCTGTTAGTA TAACAAACCC CTATAAACAG CCCAGTGAGT GGCACTGTGA TTCGAATAGA 
GATTTGGACG ACGACAGATT GTCTCGATCG GGAACAGCCT CGTCATCCGA AAACACTTTG 
GTCGTCGGTA CCGGTGGTAT CCCTCAGCGT TCTGCTTTCG GAGTGCTGTT GGCTGGTGCC 
CGGCGTGCTG CCAAGGTAGC TCAAATTTCT GCTACGAAAA AGACAGAAAA GCAGAGAGCT 
AGAGGAGGGT GGCGCAACGG AAATGGTCGA CAGTATCAAG TTCACTACTC CGCCAGATCA 
TGTCCGCTGT ACAAGAAGAT CACTGGCACT GACTTTGTCT GCGACGGTTT CCATTATGCA 
CGCAGTTCCT TGACGCAGAA TTATTTTCTC ACTCATTTTC ACAGTGATCA TTACGGAGGA 
ATTTCGAAGG CATGGAACGC TGGTACCATC TATTGCTCAT TCTCGACAGC CAACCTTGTA 
AACCAGCAAC TCGGTGTAGA TCGCAAGTTT TTGCATCCCC TTCCCATGAT GACTCCTATC 
GTCGTTGCGA GTCGGGGAAA ACCTGTTACT GTCACTTTAC TGGATGCCAA TCACTGTCCC 
GGGGCCGTCA TGTTTTTGTT CGAGGTGGGG AATAGACGGC TTTTGCACGT GGGAGACTTT 
CGATGGAATC GTGAAATCAT GCAAGCCCAA GGTCCACTAC GACCATTTTT CGACCGCACT 
CAAAACCTCG ACGAGATTTT TCTTGACACA ACTTACTGTG ATCCCAAGTA CTCTTTACCA 
GATCAGCAGG AGGCTATTAA GGAAACTGTA AAAGTTGCAA TCGAACAAGT GGGACTTTCG 
AAACGCAATA AAGATCGCAC GCTCATGCTA TTCGGTGCTT ACACCATCGG CAAAGAGCGC 
ATTTATCTTT CCGTTGCAGA AAAGCTCGGG CTTAAGGTTT TTGTTGACAG TCGTCGATAT 
CGAATATTAA AAGCACTAGA ATGGCCATCG GAATCTATCG CTATGTTAAC CACGCGACCT 
GAGGAAACAA TACTGGTCAG TTATTCAAAT GGACGATACA CTGGGATTAA GTCCGATTTC 
TGTACTGATA TCTGA 

 

Protein sequence

MPRQIRTCVV CQRRFLAPTL HITHCAACLA VQNSPTVSME TSSRRHLDLP KDGTPPEFQV 
DDAPASECKE ETGRSSRPAK RPKAAGELTV NARTLSNEYL NPSCISFQQR TQTMQPIHLD 
HVDQVQTVDK EASVEKIDDS DDEEMGSEAG DELRCIQIVD LLSDCIDEND EPDSEDEWAE 
DVPLHALVPA NPRLPLGMKP TKSKNPLTTH VKPELMSGDG SKALRPVNDD GDGFDEDYCR 
IINTFSNDKN GDADTSMTCM MCGKSLQHLK TGIKGRLTHI KRCSKKYGVT ARDIRLDDDH 
EVFAMNQKSA LSPTTKLAAR SVSITNPYKQ PSEWHCDSNR DLDDDRLSRS GTASSSENTL 
VVGTGGIPQR SAFGVLLAGA RRAAKVAQIS ATKKTEKQRA RGGWRNGNGR QYQVHYSARS 
CPLYKKITGT DFVCDGFHYA RSSLTQNYFL THFHSDHYGG ISKAWNAGTI YCSFSTANLV 
NQQLGVDRKF LHPLPMMTPI VVASRGKPVT VTLLDANHCP GAVMFLFEVG NRRLLHVGDF 
RWNREIMQAQ GPLRPFFDRT QNLDEIFLDT TYCDPKYSLP DQQEAIKETV KVAIEQVGLS 
KRNKDRTLML FGAYTIGKER IYLSVAEKLG LKVFVDSRRY RILKALEWPS ESIAMLTTRP 
EETILVSYSN GRYTGIKSDF CTDI