Gene PHATRDRAFT_31997 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPHATRDRAFT_31997 
Symbol 
ID7196467 
TypeCDS 
Is gene splicedYes 
Is pseudo geneNo 
Organism namePhaeodactylum tricornutum CCAP 1055/1 
KingdomEukaryota 
Replicon accessionNC_011669 
Strand
Start bp1424400 
End bp1425380 
Gene Length981 bp 
Protein Length293 aa 
Translation table 
GC content50% 
IMG OID 
Productpredicted protein 
Protein accessionXP_002177291 
Protein GI219111079 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCCCGCT ACAATAGCCA CAGTAACGTC ACCACGGCTG TTCTTGATAC AATCATTAGT 
CGCGAAGCGA GTGACCGGGA AGGTATCGCG CAGAATCAGT CGTTGTGCCG GACGATGGCG
TCGCGCTTGG CGGCACCGTA CGGCGATCTG GAACAAACAC TGTTACCTTT GTGCAAGGAA
AATAATGCCG TCGCGGAAGA AACAGACGTC CGGGCGTTTT TGCAAGAACA GCGTGCGCGA
ATCAAGAAAC TGGCCAAAGG CAATGTGGAA CGCGAACGCA AACTCCAAAT ATTTCTAGAA
ACGCTCCGAA CGTTGAAGGA ACAAGCTCTC AACGAAGCCA ATACCGATCC CAGTACAGAC
GATGAGCCGA TGCAAGTTGT AGATTATAAA GAAAAGATCG AGACTTTGAT GGAGCAAACG
CGAGTGGAGC ACCAAAACAC TCAACTGCCG ATGCACCAGG AAGCATACTA GTAAGTACGC
GTTGTTGGGA TTGAACCGTC TCACTTCACG GAAACTGTAT TCCTTTTTCC GCAACCTTAC
CGTCGCAATG CTTCGCTCAA ATATTGCAGT CGCGAAATTC TCGCAGAGCT CGGGGAGAAG
GAACCTGTAC TTGTCAAAAA GGATGGCGGA GACGATGACG ATGACGACAT TGAGTTTCTG
AACCACCAGA GTAGCTCAGA GAAGTCGCTA AAATGCCCCA TCACCATGGT TTTACTGGAA
GAACCCGTCA AGAATAAAAC ATGCAAACAT GTATACAGCA AGGCGGGAAT TATGCAGCTT
ATGGGACAAA AAGGCTTTTG CAAATGCCCA GTACCGGGCT GCGGGAATCA TCAAGTAACG
CTCGTGCAGC TGGAGAAGGA CCTGCAGAAG GACATGCTTG TCCGACGAGC TCGTCGTCGA
CAGGCCGCCG ATTCGGAGCA GCAGGCTTCG CAAGCGGAAA TGCAGGATTC CGATGAAGAA
GAACAGGAAG CAGCACTTTA G
 
Protein sequence
MSRYNSHSNV TTAVLDTIIS REASDREGIA QNQSLCRTMA SRLAAPYGDL EQTLLPLCKE 
NNAVAEETDV RAFLQEQRAR IKKLAKGNVE RERKLQIFLE TLRTLKEQAL NEANTDPSTD
DEPMQVVDYK EKIETLMEQT RVEHQNTQLP MHQEAYYREI LAELGEKEPV LVKKDGGDDD
DDDIEFLNHQ SSSEKSLKCP ITMVLLEEPV KNKTCKHVYS KAGIMQLMGQ KGFCKCPVPG
CGNHQVTLVQ LEKDLQKDML VRRARRRQAA DSEQQASQAE MQDSDEEEQE AAL