Gene PHATRDRAFT_31625 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPHATRDRAFT_31625 
Symbol 
ID7195969 
TypeCDS 
Is gene splicedYes 
Is pseudo geneNo 
Organism namePhaeodactylum tricornutum CCAP 1055/1 
KingdomEukaryota 
Replicon accessionNC_011669 
Strand
Start bp552882 
End bp553639 
Gene Length758 bp 
Protein Length199 aa 
Translation table 
GC content47% 
IMG OID 
Productpredicted protein 
Protein accessionXP_002177108 
Protein GI219110713 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGAGTCAG TGGACGATAA AAACCTATCT TACACCTCCG AAGAGGATGA ACTCAATGGT 
TCCGTTGACT CGGTAGCGAT TCCGAATGCT TTGGGAGCCC CGGCACCAAA TGACCTATCC
CGTTACGTCT GCTCCCCAGA CTCAATGGAT GTAATCTGTG GTCGTGGAAA GAGCGGACCA
CACCCAGGAA ATCAGCGGTT TCGGAAGTTT GTATCGGACA AGAAGGCTGC ATACCAGGCT
GCTAAACGAA GAGAAGACAA AACACGCATC ACGCTGTTGA TCGTTGAAGA GCTGCGAAGA
GGCCTACCTC CATCGAGGTA AGAGCATCGA AAACGAGTGT GCAAAGCTTT TCGTTCTCTT
CACCTTACAA TCTTTTTTGG TTACAGATTC TTACTGAAAG ATCCCAAGAC GCAAATGTGG
TACGTTGTAT TCCACGAATT CTTCAACTGA CAGTATAATC TGTGGAAAGT GACATTCTTA
TTCTCGTCCT CCTCCTTTTC AACAATAGGT ACGATGCAGG GGTAGAGTAT GCTCGCGAAA
AGGTGAGCCA CGCATTGCGA AGCCGTCCGA GCGACGATAG CAAAAAGAGG GCGAATAAGC
CAAAAAAGAA AGGAACACGC AAATCTCAGC ACGCGCCTGA ACTCGACGAG ACTGTGGAAC
GGCTAATCAA AGAACAGCAG CATCTTTTGA GATCAATGAT TGATAAGAAA GTTTTCCCTG
TGTGGATGCA AGACGTGAAG GAAAAATTGA GCACCTAG
 
Protein sequence
MESVDDKNLS YTSEEDELNG SVDSVAIPNA LGAPAPNDLS RYVCSPDSMD VICGRGKSGP 
HPGNQRFRKF VSDKKAAYQA AKRREDKTRI TLLIVEELRR GLPPSRFLLK DPKTQMWYDA
GVEYAREKVS HALRSRPSDD SKKRANKPKK KGTRKSQHAP ELDETVERLI KEQQHLLRSM
IDKKVFPVWM QDVKEKLST