Gene PHATRDRAFT_3145 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPHATRDRAFT_3145 
Symbol 
ID7203755 
TypeCDS 
Is gene splicedYes 
Is pseudo geneNo 
Organism namePhaeodactylum tricornutum CCAP 1055/1 
KingdomEukaryota 
Replicon accessionNC_011685 
Strand
Start bp583234 
End bp584796 
Gene Length1563 bp 
Protein Length324 aa 
Translation table 
GC content50% 
IMG OID 
Productpredicted protein 
Protein accessionXP_002182988 
Protein GI219125437 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGGACGTCG GTGGTACCTT GGCGAAGCTG GTCTATTTTG AACAAGAAAC AGATGCTCCT 
GTCGAAGGCC ATCGGGAGCG ACAGTACCGC AACGCGGCTT CGGCGCAGAC GGTATTGAAC
GCACGCAATA GGGTGGACGA TAGTGGAATC GACTTGTGTG AGTCAAAAAG ACGCATCGGA
TCACCTACCC GACACCACGG CGCAAACGGC AGTACACGAG CACCTCCGCT GGGTACAATG
CATACAGGGA GCAACAGCCT GTCCAGCTCA GATTCCAACG CTGACTTGGA AAAATTGTCT
TATCTGCGAC AAGAGTCGAT GCCGGATGAC TTGATTTTGT ACGCCAAAGC CGTGCAACAA
CCAAATGACT CTTTACACGA TGAACACTTA CGGAAATCTC GATCCATGCT TAACTTGTCG
GGCTCTTCCA AAGATCGGGC CGAGGCGATG GAACGGTTCT ATGATTTTGC CCGGCGGCTC
GACTCCTACC GCGCTGGAGC CAAGGATCAC AAACTCTCGT TTTATAGCCG TGAGCTCGGT
GGCGAATTCC ATTTCATACA ATTCGAAACC CGCCGAATGC AAAACGCCAT GGACTTGATA
CGGGCCAACG ATCTACACAA TCACATTGTG GAAATGGGTG CCACTGGAGG GGGTGCGCAC
AAGTTTGCAT CCGCTTGGCA GGAGGAGCTC GGCATCACCA TGCACAAGGA AGAAGAGCTA
GAAAGCCTGG TTGCCGGTAT GCAGTTTGTT CTGAGTACAG TAATAGGCGA ATGCTACACA
TATAGACCTG AAGAACTGTC CAGGGCATCC TCGCGGACTC CTTCAACTAG TGAATCATCG
GCTGGAGCTA CTGCTACTAT CGGCAATTCG AAAGTTCCGA TTGGCAAGCC CCTATCAGAA
GATGAAAACG ACGAAAGAAT ACGGAGAGAG GATAAAGCGA AAAGCAAAGG TGACGGATGG
CGGTGGTCAC GGAAAGTTCA ACGAGACGCC ATCACATACT CCTCAACTTA TCCATACATG
CTGGTTACGA TTGGAACTGG TGTAAGTATT CTACGTGTGG ATGGTCCACG CAAGCATGAA
CGTGTTTCTG GTTCGACCAT TGGTGGTGGG ACTTACTGGG GTCTGATTCG GCTCCTTACG
GATATTGACG ATTTTGAACA TGTAATGCGA CTAGCGGAAC AAGGCGATGC GACAAAAGTT
GATATGATGG TGGGGGATAT TTACGGCAAC AAGAGCGACG CTTTGGAGAA GCTGGGCCTG
CCATCAAATT TGGTGGCGTC CTCGTTTGGA AAGCTTGTAG CCAAAGATGA TCCAGCAAAT
GGTTTGAAGG AAGAGGATTT GGCAAGAGCT CTCTTACTCA TGGTCACCAA CAATATCGGG
CAAGTTGCTT ACTTGAATGC AAAGCTGCAT AATACACCAC GCATCTACTT TGTAGGAAAT
TTTTTGCGAC AAAATAATAT TTCACAAAGG CGTTTGGCGT ACGCGATAGA CTTTTGGAGT
AAAGGTGAGA TGGAGGCTCT CTTTTTGGAG CATGAGGGCT ACTTCGGTGC GCTGGGAGCC
TTC
 
Protein sequence
LDVGGTLAKL VYFEQETDAP VEGHRERHRE LGGEFHFIQF ETRRMQNAMD LIRANDLHNH 
IVEMGATGGG AHKFASAWQE ELGITMHKEE ELESLVAGMQ FVLSTVIGEC YTYRPEELKG
DGWRWSRKVQ RDAITYSSTY PYMLVTIGTG VSILRVDGPR KHERVSGSTI GGGTYWGLIR
LLTDIDDFEH VMRLAEQGDA TKVDMMVGDI YGNKSDALEK LGLPSNLVAS SFGKLVAKDD
PANGLKEEDL ARALLLMVTN NIGQVAYLNA KLHNTPRIYF VGNFLRQNNI SQRRLAYAID
FWSKGEMEAL FLEHEGYFGA LGAF