| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PHATRDRAFT_31442 |
|---|
| Symbol | |
|---|
| ID | 7196632 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
|---|
| Kingdom | Eukaryota |
|---|
| Replicon accession | NC_011669 |
|---|
| Strand | + |
|---|
| Start bp | 102422 |
|---|
| End bp | 103390 |
|---|
| Gene Length | 969 bp |
|---|
| Protein Length | 322 aa |
|---|
| Translation table | |
|---|
| GC content | 54% |
|---|
| IMG OID | |
|---|
| Product | predicted protein |
|---|
| Protein accession | XP_002176522 |
|---|
| Protein GI | 219109535 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 26 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGGAATTC TTTGGTCCAG TTTTGCTAGT GGGGCACACG CCGCATCGTC CATGACTGCC
GCCAAGCCGA CAATCTTGGG GAGTAACGCG GTCAATAACT TTGCCGGAGC CTTCCCGACA
CTCCGAGTCG TCTCGACAGC CCTGCTTCTC GTGTCCTCTT TTGGAGGTGT CCTTCTCCAA
CTGGCATTAC GACAGCTACA ATATGGGGCA GCCTGGTACA TGACGCAACT AGCGCTCTAC
CCCGTGCTCA CCAAGAGTGC AACGGCCGCT CTCATTGGGT ACATTGGGGA TTACATGGCG
CAATGGCTGG AGTACAAACT GGAGCAGAAT CATCAGAAAG GCGTAATCGG CGGCGGCTCC
TGCGACGGTA CCCAACAACA CCACAAAATC TCTCTGAACA GTTCAAATTC AAGGGTCTCC
GCCCGTAGTA ATCTGTCTAT CCATGGCACC TACGATCTGC GACGTGGTCT CTCCATCATG
ACGGACGGCT TACTTATCTC CGGACCGCTC ATGCACTTTG GATACGCATT CTTTGAACAC
CTCGTGCCCG TTTCGACTTC GCCCCTCGCT GCGATGTTAC ACGTGATTGC TGATTCTATT
CTGCTCGATA GCATCTTTGT CGCCACCACC TTTCTCGTCA CCGGATTGTT TGAAGGGTAC
CGGTGGCAAC ACTTGTCGTC GCATTTACGA TCCGATTACT CCTCCACCCT CAAGGCCAGT
TGGGGCACCA GTCTGGCACT CATGCCACTC GAATTCGTCT GCTTCCGATA CTTGCCAGTA
AGCCTGCGAG TCTTGGCCGT CAACTTTATT GACGTGGTTT GGGATGCCGT CATCAGTTTC
ATGGTGCACC GGAAGCGCAA ATCCAAGCAA GTAACCACGG AAAGTCTGGG GACCGCCACA
AATGATGCCG TGCTTTGTGA CGAACCCACA CTGCGACGGC CTAAAATTGA ACCGGCATTT
GCATCCTAA
|
|---|
| Protein sequence | MGILWSSFAS GAHAASSMTA AKPTILGSNA VNNFAGAFPT LRVVSTALLL VSSFGGVLLQ
LALRQLQYGA AWYMTQLALY PVLTKSATAA LIGYIGDYMA QWLEYKLEQN HQKGVIGGGS
CDGTQQHHKI SLNSSNSRVS ARSNLSIHGT YDLRRGLSIM TDGLLISGPL MHFGYAFFEH
LVPVSTSPLA AMLHVIADSI LLDSIFVATT FLVTGLFEGY RWQHLSSHLR SDYSSTLKAS
WGTSLALMPL EFVCFRYLPV SLRVLAVNFI DVVWDAVISF MVHRKRKSKQ VTTESLGTAT
NDAVLCDEPT LRRPKIEPAF AS
|
|---|
| |