Gene PHATRDRAFT_31436 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPHATRDRAFT_31436 
Symbol 
ID7196631 
TypeCDS 
Is gene splicedYes 
Is pseudo geneNo 
Organism namePhaeodactylum tricornutum CCAP 1055/1 
KingdomEukaryota 
Replicon accessionNC_011669 
Strand
Start bp92754 
End bp93590 
Gene Length837 bp 
Protein Length238 aa 
Translation table 
GC content49% 
IMG OID 
Productpredicted protein 
Protein accessionXP_002176518 
Protein GI219109527 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.0440287 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAGACTG CTACGTTGCT TCCTCTAGCT TTGTGCAGTA CCGTCGCCTG GGCGTTTACT 
CCATCCAGCC CGACACGACA ACGTATCGGG CGAGCATCGA AATCGACGAG CTTCACCGGT
AGCGTAACAC CGACCACTCG TCGAGAACTT GGGACCGGCC GAGGCTTGGT CCGCCTACAA
CGGAGCCCTC GAGGCGAATC CTTTGATTGT CAAGTCAGTC ACTGCCGGTA TCATTCTGGG
AGCAGCTGAC TTGGCAGGGC AAACTCTAGA GGATTTTCAA AAGAAACAAG AAGGTGATGC
GCAAGAAGCG CTCGAGGAAT TCGGGATTGA TTGGCTTCGC TCGGCGCGGT TTGCTATCTT
TGGGCTCGTA CTACAGGCTC CCTGGAATCA CTTCTACTAT CTGGCTTTGG ACGGACAGAT
CCCTCCCACC ACAGAGCCCT TCACCACCAC CAACGGCATC AAAGTTCTCA TCGATCAGTT
TGTACAAGCT CCAATATTTA CCGTGTTGAT CTTTGTATTC TTGGGGACTT TGGAAGGCAA
GACTCCTAGC GCCATTAAGA ATCAACTGAA TAACGACTAC AAGGACACTA TCTTGGCCAA
TTGTAAGTTC AGTTTCCACG GCACCTCCTA TGGAGATTTT CGTTGACAAG TGAGATGCAT
ACATGCTTCT AACAGTCTGT GTAACATTCC CTCTCGACAG GGAAACTATG GCTGCCGGCG
ACTGTCATTA ACATTGGTTT TGTACCTCCA TTGTTTCGAG TGCTCTATTT GAATGGAGTC
TTCTTCTTTT GGTCTATTTA CCTTTCGCTA AAGCTCAACA AAAAGGACGA AGCCTAA
 
Protein sequence
MKTATLLPLA LCSTVAWAFT PSSPTRQRIG RASKSTSFTG SNLGPAEAWS AYNGALEANP 
LIVKSVTAGI ILGAADLAGQ TLEDFQKKQE GDAQEALEEF GIDWLRSARF AIFGLVLQAP
WNHFYYLALD GQIPPTTEPF TTTNGIKVLI DQFVQAPIFT VLIFVFLGTL EGKTPSAIKN
QLNNDYKDTI LANWKLWLPA TVINIGFVPP LFRVLYLNGV FFFWSIYLSL KLNKKDEA