Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PHATRDRAFT_31339 |
Symbol | |
ID | 7199362 |
Type | CDS |
Is gene spliced | Yes |
Is pseudo gene | No |
Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
Kingdom | Eukaryota |
Replicon accession | NC_011699 |
Strand | - |
Start bp | 181255 |
End bp | 185403 |
Gene Length | 4149 bp |
Protein Length | 482 aa |
Translation table | |
GC content | 53% |
IMG OID | |
Product | predicted protein |
Protein accession | XP_002185538 |
Protein GI | 219130786 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | CTAGTCTCAC GCTCACACAC CGCTTCATTG AGTGCCCAGC ACGTCGGTTG CCGCCGTCAT TGTCGTTGCT TTCATCTCGT TCTCAAATCC GAAAAGCGAA CGACTCCTCC ATCATGATTG TGGCACTTGT GGTAGTTACG GGCCTGACGG CGTTGTGGTT CTTCTTGCTG CGACCTCGCA CCGGCGGGAA GCATGCACCG CCCGTCGTAA CGTCTTCCCC CTTGGTGCCC ATTCCCGTCA TTGGACACAT TGTGGAGTTC TTCCGTTCCC CCCATTTCAT GATGCAGCGC TGCTTGAAAG ATCACGGCAA GGTCTTTACC ATTCCCGTAC GTATCTACGG ATTGCGTGTG TTTACTCGAT ATGTGTGTGT GTGTATCGAG TTGTCCTTTT GGCAAAGATT CCACATTGCT TGGTCTTGGC TTTTGTATCG CCGGTCGCGG TCTTTCCCGT CCCACTGAAT CCGATTCAAC TGTAACGCAC TCGCCGTCAA GCGCACCGCA AACGAACGTG GCCAAATCTG TCCCTATGCC TCACCACTGA TTGGTCATTG GTCGCTCCCA CACAGATCTT CCACAAACGC TTGACCTTCC TCATTGGCCC GGAAGCCCAG GAGATCTTTT TCAAAGCCAA CGACGATGTT CTCTCGCAGT CCGAAGTCTA CGACTTTACC CGTCCCGTCT TTGGAAACGA TGTCGTCTAC GACGCTTCCA AAAAAAACCG ACAAGTGCAG TTCCAAACCA TGGCCAACGG ACTCCGCACC GCACGCCTCA AGGCCTACAT TCCCAAAATT GAACAAGAGA CCCGGGCCTA CATCAAGAAT TGGGGTGACG CGGGACAGAT TGATCTACTC AAGGCCCTGT CGGAACTTAC CATTCTCACC GCATCACGCT GTCTGCACGG TGAAGACGTC CGAACTCACA TCTTCAAAGA AGTCCAGGAG CTATACCATG ATTTGGATCA CGGTCTGACG CCGCTCACGG TATTTTGGCC AACGGCCCCT TCCCAAGCCC ATCGCAAACG GGACGTGGCA CGCAAAGAAA TGGTGCGACT CTTCACCAAA GTCATTGAAG AGCGACAGCT GCATCCGGAA CGGTCGGACG GTACCGATAT CCTCTCACTC TTTATGGACA TTAAGTACAA AGACGGCTCG GCCGTTACCA TGGACCAAGT AACCGGACTG CTGATTGCCC TCTTGTTTGC GGGACAGCAT ACGTCCTGTA TCACGTCAAC CTGGACCAGC TTATTCATCG CCAACGACCC AACGTTGGTC TCCCGTATAC TGGCCGAGCA AAAGACGGTC CTGGGTGGAG ACCTCAACAA ACCCATTGAG TACGAAGATT TGCAAAACAT GGAGTTATTA CACAATTGCA TGCGGGAAGC CCTCCGTATG TGCCCCACCT TTATCATGAT CCTTCGTAAA GCCGAACGTG ATGTTAAAAT TCAGTCGGAA GGGAAATCGT ACGTGATTCC GCAGGGCGAC ATGGTCGTGG TTAGTCCCAC TGTATCCATG CGAATGAAGG AGACTTTTGC CGACCCCGAT ACCTACGATC CGGATCGCTT CGCCGCACCC CGGGAAGAAC ACAAGCAGCC CTACGCATAC ATGGGCTTTG GAGGGGGACT ACATTCCTGT ATGGGACAAA ACTTTGCCTT TTTACAAGTC AAAACAATTA TCTCCGTACT CTTGCGCGAG TACGAACTAG AACGAGTCGA ACCAGGCATG CCCGATATCG GCTACGACGA TATGGTCGTT GGACCCAAAG GGGATTGCAC CGTGCGCTAC CGTAAGCGCG TCCAATCGTG ATTTATTGTT TCGTGCACTA GGTCTTTCAT CGAATATAGA GTCGACATCA AATCACACAA AGATTGGCAA GGTTTTGTGT TGCAGCCGTT CATGTAGTTA GCGAAATTTA AGTGCCTACG TTGGATACTC TTTTTAGTGC CTAGCGTAAT GAGGCTGTGG GTGCCCATGG CAAGATGTTT GTGTTACCCG TGTAGTGCTT CATTGCCGTC TGCCAATGAT TAGAAATGTT TATTGCAGGT GATGGACAAA CCGAACCCCG CTAAAGTTTT TTAACATCCG TCTATTCTCC CCCAAGGCTT CATGAGGTAG TTTGGTGCTG TTTTTGCCAT ACCGCTACGC CTTCCTTGAG ACGATTGACG AGCGTGCTCT CGGTGATCTC CTTGAGCACG GCCCCCTCAA CGTAATTGCA GCGCTTTGCA CGAATGCGCA GACTGGACGC CCCGGTCAGG CCTTTGGTAA TTTCAACGGC CACTTCCATC CCACCTTCCT TGGTGGTCAT TTTCATAGGG GTATTGACGG TATTCGAATT CGCCTTGTCG CGAGTCCGCT CTTCTTCCTT GCTCAAATAT TTGTTTCCAG TGTTGGTCGG CATAAATAAG AGCTGCACAG TAGCTTGTTC AGCGACTGTC GGTGGCAGTG GACTCCTTGA CAACGGTGGG GGTGGAACCT GGGCCCGAAT AGGTGTCGTC AAGCCCTTAC CTGTCTCGGC CAATAGCATA GCCCACTCAC GCACGTATTC GACGAGTACG GGGAAGTCGA CGGCGACATC GGAACTTGGT ATAACTACGC GGTAGAGTTC GGGCCCGTCG AGCTGCAAAA AGGAATCGTC GAGGATGGCT TGTTGTGTCA GTTGTTCTTC AGCAGTGGCG GCGGAAGCGG TACCAAGCTT GCCGGCACAG GACAGGGTAG CATTACGAGC AAACGGTTGC ATGGCGATAG CTTGTGTTAC GATGGATACG GCTGTCTCAA GCTCCAAGTT CCCGTCAACG GCATCCCCTG ATTTCAAGGC AAACCCATCC GAAACAATAT CCGTGAGCTC GCCGAGTTTG CAAATGGTAT AATCTAAGGC GGGTTCCACA GCGCGGTTGC GAACAGTGCT GATCAGGCTT TCTTCCATTT CGCGGCGTTT CTTCAGTTTA CCTCCCATGA GATTCTGCAT ACTGTAGGGC ATTTTATCGA AGCGCTCCGT TCCCAATGTG GAAAGAGCGA CAATCTGTGT AGGAGGGCGA CCAACGGCAC CATCGGCGCG CAGAATTTTG CGCAAACACC GGTCCAACAA GTTCTTGACC GACGACTGAT CACTGAGAGA CGTCAGGAAT AATAAAACGA CTTTTGCATT GTCCGCTCCC AAAGGAATCG TCGCAGTCGG TTTGTAAACG TCCACCACAA TGCCCGGCAA GAGCTGTGTA AGCGATGCCG TCAAGGGAGC AATCAGTTTT TTGGCGAACA CATCCTGGGA CTCGTCCGCC ACTACGACGA TGCGATTCTC CGAATCGGCA ATCTTTTCAG TCGTCGCATC CTTAGATTCG GGTTCCTCGT CCTTGATTCG TGCTCCGCTC TGTAAGGCCG ACTGAATACT ACCTAGCAAG ACGTTGCTGC CAGAAGTGGG CACGGCGGCA CCGTTCAGGA CGCCCCACAC ACCCACTTCC AATCCTTCTC CTTCCATGGA TTGATCCGCC GCTGCCGCGC GCTTGGTAGT TGTCCGGGCG AATTCGTTGC TCGATAAGAA GGCGTCCGTG AGCGCGTCGA TCTTGCGCAG AAGCCGATCG GACTCAACTT TGGCGCGAGC GTCTGCCTGC GCTTGCAGAC TCTCTGACTG GCGTTTCAGT TCGCGCTGTA AATTGGCTCG GAGCAGGGCG ATTTCGTCAA TACCCTTGGC GACCCCGTCG TTGATGACCT CCGTGGCTGC GGCTTTGAGT TCCGCGGCTT CCTGGTCACT CAGCGGCTCC AACATACTTC CCAGATCAAT TCCAAGGTTC GTACCTACGT CTGGCAAGGC GCCGGCATCG AGCGAAAACA ACGGCAAGTC CACATTCTCC TTCTTACTAG TCTTGTTGTT GATCTTTTCT ACATTGCTCT CCTCGGCGCT ATCGGAATTG CTGTGGGCGG CTGCTTGTCG TGTTGTGGTA TCCATTGGAG CAAATTTCTC AACCCGCCAC GAGCAGGGAC GGACCGTTCG CACTCTGGCA CCCCACGGGG TTGGAGCAAA GGCGCACACG CGCCTGGAAT CGATGCACAT CAAATGCAAG AGTAACATTT CCGCAATAAG GGGGATTCGC GTGAGCGTCA TGGCGCAAGA AGTGGAAGGA AACGGATAGA TTTATATTGA CCTAGAGTGG ATGCTACTG
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Protein sequence | MIVALVVVTG LTALWFFLLR PRTGGKHAPP VVTSSPLVPI PVIGHIVEFF RSPHFMMQRC LKDHGKVFTI PIFHKRLTFL IGPEAQEIFF KANDDVLSQS EVYDFTRPVF GNDVVYDASK KNRQVQFQTM ANGLRTARLK AYIPKIEQET RAYIKNWGDA GQIDLLKALS ELTILTASRC LHGEDVRTHI FKEVQELYHD LDHGLTPLTV FWPTAPSQAH RKRDVARKEM VRLFTKVIEE RQLHPERSDG TDILSLFMDI KYKDGSAVTM DQVTGLLIAL LFAGQHTSCI TSTWTSLFIA NDPTLVSRIL AEQKTVLGGD LNKPIEYEDL QNMELLHNCM REALRMCPTF IMILRKAERD VKIQSEGKSY VIPQGDMVVV SPTVSMRMKE TFADPDTYDP DRFAAPREEH KQPYAYMGFG GGLHSCMGQN FAFLQVKTII SVLLREYELE RVEPGMPDIG YDDMVVGPKG DCTVRYRKRV QS
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