Gene PHATRDRAFT_30394 details

Gene Information

• Locus tag: PHATRDRAFT_30394
• ID: 7195728
• Type: CDS
• Is gene spliced: Yes
• Is pseudo gene: No
• Organism name: Phaeodactylum tricornutum CCAP 1055/1
• Kingdom: Eukaryota
• Replicon accession: NC_011690
• Strand: -
• Start bp: 438314
• End bp: 440483
• Gene Length: 2170 bp
• Protein Length: 559 aa
• GC content: 49%
• Product: predicted protein
• Protein accession: XP_002184252
• Protein GI: 219128084

Plasmid Coverage information

• Num covering plasmid clones: 14
• Plasmid unclonability p-value: 0.382636
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

CGGAGTCTTT CCCGCGTGCA CGTCGTCGTG ATCCTGTCAT CCGGACAAGA TCGTCTTCGT 
CGTCGTGAGA TTGCGTATTC CCACAGCGCT TCGACAGCCG ATTGCCGCAC CCGAGCGCTT 
TTCAGATCGA CGTTGCTATT CCCATGTCGA AAGAAGCGGC GCAATCACCG AAAAGCGGAA 
AAACGATCGA TCAGACCGCG GATCGGACGG CCATTGTCGC TGCTCGTCTC AAGAAGCTGT 
ACAAAAATTC TGTCTATCCC GTCGAAAAGA AGTATCGCTA CGATTATTTC TTTGAAAGTC 
CACTTTTGAG TGACGTCGAG TTTGATGGTG CGTACTCCAA ACGAAGTTTG AGGTTCTTTT 
GCTTTTGCCA AATGCTTTTA GTGTTGGCAA AGGACCTCAC ACACTCTTGC ACTCTCTCGT 
GATAACACAG CCAAGCCTCA AGTGCTTCTG GTTGGACAAT ACAGTGTAGG AAAGACTTCC 
TTCATTCGTT ACCTACTCGG TAGAGACTTT CCTGGTCAAC GGATCGGTCC CGAGCCTACT 
ACCGATCGAT TCACCGTATT GCTGAACGGC CCGGAAGAAC GCACTATTCC GGGAAATGCT 
CTCTCGGTGC ATCCTGATCT ACCCTTTCGG GGTCTCGAGC GCTTTGGAGT CAGTTTTCTG 
AGTCGCCTCG AAGGCAGTCA ATTACCAAGT AGTGTTTTGA AATCCATCAC ACTCATCGAT 
ACCCCGGGTA TCCTTTCGGG AGAAAAGCAA CGCACCAACC GTGGGTACGA TTTCACGAAA 
GTCGTATCCT GGTTTGCCGA AAAGGCGGAT TTGATTATTC TGCTCTTTGA CGCACACAAA 
CTTGATATCT CGGATGAACT CAAGGGCGCA ATCGATGTCC TTAAGGGGCA TGAAGACAAA 
ATTCGATGCA TTCTCAACAA GGCTGATCAG ATTGATCGGC AACAATTGAT GCGAGTTTAC 
GGTGCGCTAC TTTGGTCGCT CGGTAAAACT ATGACCAGTC CAGAAGTAGC CCGAGTTTAC 
GTCGGCAGCT TTTGGCAGCA ACCGCTGCAG CACATGGACA ACGCCGACTT GTTCGAAATG 
GAGGAAAAGG ATCTCATGAA GGATTTGGCC GTCCTTCCAC GGCAATCAGC CGTACGAAAA 
ATCAATGAAC TCGTCAAACG CATTCGCAAG GTCAAGACCT TGGCCTACAT TATTGGCTAC 
TTGAAATCAC AAATGCCTGC ACTCATGGGC AAGGAAAAGA AACAAAAGAA ACTCATTGCG 
TACGTTTTGT GGGTGATGCG TGACTCTAAA TATGTGGCTG CTGCGTAATG TTGGTTCATC 
TTTTCCAGGA GGCGTCGTTT CGGTCACGCA CACACGTTCT CACCATTTTC TCCTTACGTT 
TCATCCACAG CGACTTACCG ACGGTGTTTC GTACGATTAT GAAAAAGTAC GACTTGGCCC 
CCGGCGACTT TCCCGAAATT GCCAGCTTTT CTAACAAACT GCACGAAACC AAGTTTGCCG 
AGTTTAATAC CTTGTCGGAA AAACAAATTG CTGATCTGGA CCGGGTCCTG AATGAGGATA 
TTCCCAAACT CATGGAAGAA TTGCCCAGTG AAAAGGACTC TCCCGACATT ATCCGATCCA 
AAATGGGAGC TGCTGGTGGC ATCGCCAAGG TTCCGGTCCC GGTCGCCAAT AATAAATTCG 
GCAAAAAAGA AACGGCTCAC GAAAGCAATC CTTTTGGCTA CGATGAGGAG AACGAAGATT 
ACTGGTACGT GTCACAACCA AGAAACGGTA CGCGTTTTGC GTATCTCCAG GTCTAGCGTG 
TTAACATGCA ATATCTTTAC TCTGTTGTAC AGGGCACTGC AGGATTCAGC AGATCGTCTC 
CTGCCAAGCT TTGAAGCCTT GGGACCAGAT GGTGGCTATC TCTCGACGGC CAAGGCACGT 
GATGTGCTGG TCAAAACGGG GCTCGAAAAG GACCAACTTC GCCAAATCTG GAACCTTAGC 
GACATCGATA AGGACGGTCT CTTTGACCAT GACGAATACG TTGTGGCCAT GTTTTTGTGT 
GATGCTGTTC TGCAAAAAGG TCGACCCATT CCCTCCGAGC TCCCGGCGAG TGTTATTCCG 
CCGCGCAAGC GATCACTGTT AGCAGAGAAG AGCAGCGTAT TTTAAAGGGC AATAGCAACA 
ACATCAAGAG 

 

Protein sequence

MSKEAAQSPK SGKTIDQTAD RTAIVAARLK KLYKNSVYPV EKKYRYDYFF ESPLLSDVEF 
DAKPQVLLVG QYSVGKTSFI RYLLGRDFPG QRIGPEPTTD RFTVLLNGPE ERTIPGNALS 
VHPDLPFRGL ERFGVSFLSR LEGSQLPSSV LKSITLIDTP GILSGEKQRT NRGYDFTKVV 
SWFAEKADLI ILLFDAHKLD ISDELKGAID VLKGHEDKIR CILNKADQID RQQLMRVYGA 
LLWSLGKTMT SPEVARVYVG SFWQQPLQHM DNADLFEMEE KDLMKDLAVL PRQSAVRKIN 
ELVKRIRKVK TLAYIIGYLK SQMPALMGKE KKQKKLIADL PTVFRTIMKK YDLAPGDFPE 
IASFSNKLHE TKFAEFNTLS EKQIADLDRV LNEDIPKLME ELPSEKDSPD IIRSKMGAAG 
GIAKVPVPVA NNKFGKKETA HESNPFGYDE ENEDYWALQD SADRLLPSFE ALGPDGGYLS 
TAKARDVLVK TGLEKDQLRQ IWNLSDIDKD GLFDHDEYVV AMFLCDAVLQ KGRPIPSELP 
ASVIPPRKRS LLAEKSSVF