Gene PHATRDRAFT_29958 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPHATRDRAFT_29958 
Symbol 
ID7194970 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePhaeodactylum tricornutum CCAP 1055/1 
KingdomEukaryota 
Replicon accessionNC_011687 
Strand
Start bp612698 
End bp613545 
Gene Length848 bp 
Protein Length251 aa 
Translation table 
GC content55% 
IMG OID 
Productpredicted protein 
Protein accessionXP_002183517 
Protein GI219126548 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value0.579338 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GCGTGTACCC TGTGCTTACA ATTACACCAA TTCCGCTTTC TTTTCAACGG CACGTTACAC 
GCACAGCCGA TAGCATGGCG CAACATTTGG CTCGCATTCA CGGCACGGAA GAAGACAAGG
TCAATTGTCC GTTTTACTTC AAAATTGGTG CCTGTCGCCA TTCGGACCGC TGCAGTCGTC
TGCACCACAA ACCGGCCTTT TCGCAGACTC TCCTGGTGCA GCACCTGTAC CGACATCCCA
CGCGACAAGC TGAACTGCGC GCCGCTCACG GTGGCGATGC ACACGTCGAC CCCAGACAGG
CACAGGAAGA CTTTTTTGCC TTTTTCGAAG ACCTTTACGT CGAGTTTTCC AAATTCGGAC
GCATTGAAGG AATGCACGTC GTCGATAATC TCGGGGATCA CATGATCGGA CACGTCTACG
TCAAGTTTGC GGATGAAGAG CAAGCCAGTG ACGCCTTACA GGTCATGAAC GGACGGTACT
ACGACGGACG ACCCATGATC ATCGAATTCT CGCCCGTGAC GGACTTTCGC GAAGCCCGTT
GTCGTGACTA CGACGAAGAC CAGTGCGCCC GACAAGGCTA CTGCAACTTT TTACATTCCA
AACCAGTACC GCGCGCTCTC CTTCAGTCAC TTGAAGACGA CTGCGAAGCC GATAGAATCG
CCGAAAAGGA ACGACGGCGG CGGGACCGGA AAACACAAAA GAAACGCAAA CACCGAGACC
GCAGTCACAG CGAGGATCGC TCGTACCGCA AACACGGACG CAGTGACCGG CATAGGGACG
GGTCGGTTTA CGACTCGGAG GGCAGTCTAT CCCCCGCACC AAAGCACTAA ATGTAGGCAA
CACTGCAA
 
Protein sequence
MAQHLARIHG TEEDKVNCPF YFKIGACRHS DRCSRLHHKP AFSQTLLVQH LYRHPTRQAE 
LRAAHGGDAH VDPRQAQEDF FAFFEDLYVE FSKFGRIEGM HVVDNLGDHM IGHVYVKFAD
EEQASDALQV MNGRYYDGRP MIIEFSPVTD FREARCRDYD EDQCARQGYC NFLHSKPVPR
ALLQSLEDDC EADRIAEKER RRRDRKTQKK RKHRDRSHSE DRSYRKHGRS DRHRDGSVYD
SEGSLSPAPK H