Gene PHATRDRAFT_29606 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPHATRDRAFT_29606 
Symbol 
ID7203707 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePhaeodactylum tricornutum CCAP 1055/1 
KingdomEukaryota 
Replicon accessionNC_011685 
Strand
Start bp632913 
End bp634199 
Gene Length1287 bp 
Protein Length330 aa 
Translation table 
GC content52% 
IMG OID 
Productpredicted protein 
Protein accessionXP_002182876 
Protein GI219125204 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.0259516 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TCTGTCGAGC TCCTTCCTAG ACAGACATAT CAAATCAAGG TCCTCATCCT AGCTTGCTGA 
TACAGTTACT GTTGTTTCGG AGATATACTG TTTTCATTTT GGAATGTCCC GTCCCGACTG
TCACCGTCAA TTCCGAATCG GTACCTAACG GCGTACAGGC ACTACTGCCT GTGGAAGCGT
TTAGCCTACA TCAAAATTGC AAATTATGAT CTGACAGCGC TCTTAGTCGA TCGGGGGAGG
TAAAGGCATC GGCATTTTGC AGTCAAAGTT CCCAGTACTA GACAGTGAAA GACAAAAATG
TGGATACGTA CCGCCAAGAA AGTCAATAAG CGACATCTGG CGGGTGTCGT TGCGGGGATA
TTGTTAGTGA ATACGGTAGA TGCTTCATCC AACGAAGCCG GCCAAGCGCC GAGTTCTTCC
TGGTGGTCCT GGAACAAGGA GAAGCCCGGA GAGACGGCAA GCCAAACCGA TATCAATGAA
AGACAAGCGC GGAAAGATAA ATATCCACAA ATACTACGGA CGCCGCGATC TGTCGTTGAT
CACAGCTTGT CGGGTGTTTC GCCGCTAAGT CCCGTCCGAA TCCTTCGCCC CAATCCTCAT
TTGGAAATTG CCTTTGACGT TCGCAATCGC AATCCCGTGT ACGTACTCGA ACGGATGGTG
GTGACGGAGG AGAAGAATAA CAAAACTCCC AAAAAACGAC ACAATTTCTA CGAAGAAATG
TCTCTGCCGG AATCCTTTCG TGCTCGCAAT CAGCACTACC ATCAATCCGG CTATGATCGA
GGCCATATGG CACCGGCGGC AGACTTTGGG TACCAGGATG TTGACGGTGA TCCGGTAGCG
GCGGATACCT ACACGCTGTG TAACATTGCG CCGCAGCAAT CCGATTTCAA CCGCGGCATC
TGGGCCAACC TCGAGGCGTG GACGCGGCGT GTCGCGCGGG ACGCCTCGCA AAGGCGAGAC
CGGACAACGT ACGTAGTTAC CGGGCCGTTG TGGCTACCCC GTCAGCAAGT GGCGCCGCAA
AAGTTTTTGT ACAGTTATCC GGCATTGGGG ACGCCACCAA GTCTCGTCGC GGTCCCAACG
CATTTTTTTA AAGTCGTGGT GGTGGTGGCT GCCGATGCAC CGGGTGGTCA CCATCACATT
CACAGTTTTG CGTGCTTTGT GTTGGCCAAC GACGAACAGT CGAATCAAAG GACACTCGCG
GACGCATTGG TACGATGGAC GGATCTGGAA GCCGTGACGG GCTTGGAATT GTTTCCCCAA
TGGGTTTCAC CCGACTGGAA AAAGGCT
 
Protein sequence
MWIRTAKKVN KRHLAGVVAG ILLVNTVDAS SNEAGQAPSS SWWSWNKEKP GETASQTDIN 
ERQARKDKYP QILRTPRSVV DHSLSGVSPL SPVRILRPNP HLEIAFDVRN RNPVYVLERM
VVTEEKNNKT PKKRHNFYEE MSLPESFRAR NQHYHQSGYD RGHMAPAADF GYQDVDGDPV
AADTYTLCNI APQQSDFNRG IWANLEAWTR RVARDASQRR DRTTYVVTGP LWLPRQQVAP
QKFLYSYPAL GTPPSLVAVP THFFKVVVVV AADAPGGHHH IHSFACFVLA NDEQSNQRTL
ADALVRWTDL EAVTGLELFP QWVSPDWKKA