| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PHATRDRAFT_27361 |
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| Symbol | |
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| ID | 7201078 |
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| Type | CDS |
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| Is gene spliced | Yes |
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| Is pseudo gene | No |
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| Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_011676 |
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| Strand | - |
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| Start bp | 392941 |
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| End bp | 395218 |
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| Gene Length | 2278 bp |
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| Protein Length | 655 aa |
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| Translation table | |
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| GC content | 55% |
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| IMG OID | |
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| Product | predicted protein |
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| Protein accession | XP_002180225 |
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| Protein GI | 219118917 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.114186 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | CACACACTCG CAAACGTTCC AACAAACCAC TACTCTCTGG TACGGCACAT ACATACACAC
GCTGCTCCAA AAAAGAGTAT GCCATTGCGT CGGGGTGCGA ACGGGGGTTG GCAGCGCATC
TCCCGTGCCC AAGTACGCCG CGAAGAAGCC ATCGCGGAAG CCGTACGTCG GACGCTCGAG
TTGGACTCCA CCCCCGAGTA CGCCAACGAT AACGCAGCGC GCAAAGGAAC CAACGCCATG
AACGCACAGA ATCCAGAGGG TGTATACAGC GATTGGGCGT CGGAAGGGAT GCGGCGTGTC
CGGGCCGATC AAGTCGCGCG GCGTATGCGG CACTTGACTA CAATGGCAGC CCTCGGTGGG
TTCCTCTTTG GTTATGACAC CGGTGTCATC TCCGGGGCCA TGCTCATGAT TCGGCGAGAA
TTCGTCTTGA CGCCCTGGCA GCAGGAAGTT GTAGTTAGTA GTACCGTACT GAGTGCCTTT
TTTAGTTCCA TCGCGGGTGG ATCGCTGAAC CGCGTTTGGG GCCGTCGGCC CTGTATTCTC
CTAGCAGCGG CCGTCTTTAC CGTAGGGAGC CTTGTGCTCG GGGGCGCGTG GAGTTACCGT
ACACTCGTTT TGGGACGAAT CATTGTGGGA GTCGGGATTG GTCTGGCCTC CCTGACTACG
CCAATGTACA TTGCCGAAAT GGCCGCACCC ACCTTTCGGG GACAACTCGT CACCATCAAC
GCCCTTCTGG TGACGATTGG ACAGTTCGTA GCCGGTATGG TGGACGGAGT CTTTCATGGA
CTCTTGCCCG AGACGGGATG GCGTTACATG CTCGGCTTGG CGACCCTCCC GAGTATGATC
ATGTTTCTGG GATTCTTGGC TTTGCCCGAA AGTCCTCGTT GGCTCGCCAT GAACCATCGG
CAAGAAGACG CCACCAAGGT GCTTCAACAG TACCGCGAGA CGGTACAAGA AGCCCGGGAA
GAACTCAACG ATATTGTTCA ATCCGTGCAG CCATCGCCCG CAGACACGGA AACGCTGGAA
ACAGCAGACG CTACCGAACT GGAATACGGT ACCACCACAA TGACTTCCAT CGTCCCCACC
GTTGACCGTA CAGTTCCCAT GGAGCATTTG CCAGCGTCAT CGCCGGTCGA CGTCACCTTG
ATAACGATGA ATGACCAACG CTTTTTGCGA CACTTCTTCG ACATGCTTTC CGACGGCCCA
ACCCGAAGGG CGTTGATTCT GGGTTGCGGT CTCATGGTGG TGCAGCAATG TTCCGGTATC
AACACGGTCA TGTATTACGC CGCGAGCATA TACGTTATGT CCGGATTCGC GGAATCTACG
GCGGTCTGGT TGTCAGGTTT CACGGCCCTG GCTCAAGTGC TCGGTATCGC CGTCAGCATT
GTGTTAGTTG ATCGGATGGG ACGTCGTCAG CTTGTACTAG GTAGTTTGGG TGCCGTTGCG
GTCAGTCTCC TGGGATTAGG GTTAACCTTC TACTTGGCCC GGGTAACCTC GGAGCCTGTG
AGCAAGGCCT TTGGTCAGTG TGCATCCCAA CCCGCCTCTG TATGGAACGG TATCACCGCA
TACTGCTACG ATTGCACCAA CATTGATGGA TGTGGTTTTT GCGATGGCCA CTGCGTCCGT
GGCAACGAGC TGGCACCGTT GGATCTCAAC ATGTGTCCTA ACACCAGTGC CGAATCCTGG
GAGTTCCATA CTTGTCACAA CGCCTTTGGC TGGTTGTCCG TCTTTTTTAT GGTCGCCTAC
CTCTTCGCCT TTGGCGTTGG CATGGGTGGC TTGCCCTGGA CGATAAATTC GGAAATTTAT
CCCCTTCGAC ATCGGTCGCT GGCCGTCAGC TGCTCCACGG CAACCAACTG GATCGGTAAC
CTGATCGTGG CGGCAACCTT TTTATCGTTG AGTAGTCCCG CAACGTTGAC CACCTACGGT
GCTTTTTGGC TGTACGCCAG TGTGGCCATC GTCGGACTTC TGTGGTTATA CTTTGCTCTA
CCAGAAACCA AAGGATTGTC CTTAGAAGAT ATTGAAAAGT TATTTCGACG ACCAGGCGAC
GGATACGACG TCGTGAATAT GGACGATGAT GAGCCCGACG ATAGATTGCT AGACAATGGA
CTTGCGCACA GTACATCTTC GGACGATGAT GATAATGACG ACGGCGGTGG TTGCGATCAA
GAGGTACTGA ACACTCAGAA ACTAGAAAAC CAAGAATTGT CGGCGTGAGC AGCTCGCTGA
CCCCAGCGAT ACGGTTCAGC AATATATGTA CTACTTGTAT AGGAAACTCC AATAGATC
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| Protein sequence | MPLRRGANGG WQRISRAQVR REEAIAEAVR RTLELDSTPE YANDNAARKG TNAMNAQNPE
GVYSDWASEG MRRVRADQVA RRMRHLTTMA ALGGFLFGYD TGVISGAMLM IRREFVLTPW
QQEVVVSSTV LSAFFSSIAG GSLNRVWGRR PCILLAAAVF TVGSLVLGGA WSYRTLVLGR
IIVGVGIGLA SLTTPMYIAE MAAPTFRGQL VTINALLVTI GQFVAGMVDG VFHGLLPETG
WRYMLGLATL PSMIMFLGFL ALPESPRWLA MNHRQEDATK VLQQYRETHL PASSPVDVTL
ITMNDQRFLR HFFDMLSDGP TRRALILGCG LMVVQQCSGI NTVMYYAASI YVMSGFAEST
AVWLSGFTAL AQVLGIAVSI VLVDRMGRRQ LVLGSLGAVA VSLLGLGLTF YLARVTSEPV
SKAFGQCASQ PASVWNGITA YCYDCTNIDG CGFCDGHCVR GNELAPLDLN MCPNTSAESW
EFHTCHNAFG WLSVFFMVAY LFAFGVGMGG LPWTINSEIY PLRHRSLAVS CSTATNWIGN
LIVAATFLSL SSPATLTTYG AFWLYASVAI VGLLWLYFAL PETKGLSLED IEKLFRRPGD
GYDVVNMDDD EPDDRLLDNG LAHSTSSDDD DNDDGGGCDQ EVLNTQKLEN QELSA
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