Gene PHATRDRAFT_27361 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPHATRDRAFT_27361 
Symbol 
ID7201078 
TypeCDS 
Is gene splicedYes 
Is pseudo geneNo 
Organism namePhaeodactylum tricornutum CCAP 1055/1 
KingdomEukaryota 
Replicon accessionNC_011676 
Strand
Start bp392941 
End bp395218 
Gene Length2278 bp 
Protein Length655 aa 
Translation table 
GC content55% 
IMG OID 
Productpredicted protein 
Protein accessionXP_002180225 
Protein GI219118917 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.114186 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
CACACACTCG CAAACGTTCC AACAAACCAC TACTCTCTGG TACGGCACAT ACATACACAC 
GCTGCTCCAA AAAAGAGTAT GCCATTGCGT CGGGGTGCGA ACGGGGGTTG GCAGCGCATC
TCCCGTGCCC AAGTACGCCG CGAAGAAGCC ATCGCGGAAG CCGTACGTCG GACGCTCGAG
TTGGACTCCA CCCCCGAGTA CGCCAACGAT AACGCAGCGC GCAAAGGAAC CAACGCCATG
AACGCACAGA ATCCAGAGGG TGTATACAGC GATTGGGCGT CGGAAGGGAT GCGGCGTGTC
CGGGCCGATC AAGTCGCGCG GCGTATGCGG CACTTGACTA CAATGGCAGC CCTCGGTGGG
TTCCTCTTTG GTTATGACAC CGGTGTCATC TCCGGGGCCA TGCTCATGAT TCGGCGAGAA
TTCGTCTTGA CGCCCTGGCA GCAGGAAGTT GTAGTTAGTA GTACCGTACT GAGTGCCTTT
TTTAGTTCCA TCGCGGGTGG ATCGCTGAAC CGCGTTTGGG GCCGTCGGCC CTGTATTCTC
CTAGCAGCGG CCGTCTTTAC CGTAGGGAGC CTTGTGCTCG GGGGCGCGTG GAGTTACCGT
ACACTCGTTT TGGGACGAAT CATTGTGGGA GTCGGGATTG GTCTGGCCTC CCTGACTACG
CCAATGTACA TTGCCGAAAT GGCCGCACCC ACCTTTCGGG GACAACTCGT CACCATCAAC
GCCCTTCTGG TGACGATTGG ACAGTTCGTA GCCGGTATGG TGGACGGAGT CTTTCATGGA
CTCTTGCCCG AGACGGGATG GCGTTACATG CTCGGCTTGG CGACCCTCCC GAGTATGATC
ATGTTTCTGG GATTCTTGGC TTTGCCCGAA AGTCCTCGTT GGCTCGCCAT GAACCATCGG
CAAGAAGACG CCACCAAGGT GCTTCAACAG TACCGCGAGA CGGTACAAGA AGCCCGGGAA
GAACTCAACG ATATTGTTCA ATCCGTGCAG CCATCGCCCG CAGACACGGA AACGCTGGAA
ACAGCAGACG CTACCGAACT GGAATACGGT ACCACCACAA TGACTTCCAT CGTCCCCACC
GTTGACCGTA CAGTTCCCAT GGAGCATTTG CCAGCGTCAT CGCCGGTCGA CGTCACCTTG
ATAACGATGA ATGACCAACG CTTTTTGCGA CACTTCTTCG ACATGCTTTC CGACGGCCCA
ACCCGAAGGG CGTTGATTCT GGGTTGCGGT CTCATGGTGG TGCAGCAATG TTCCGGTATC
AACACGGTCA TGTATTACGC CGCGAGCATA TACGTTATGT CCGGATTCGC GGAATCTACG
GCGGTCTGGT TGTCAGGTTT CACGGCCCTG GCTCAAGTGC TCGGTATCGC CGTCAGCATT
GTGTTAGTTG ATCGGATGGG ACGTCGTCAG CTTGTACTAG GTAGTTTGGG TGCCGTTGCG
GTCAGTCTCC TGGGATTAGG GTTAACCTTC TACTTGGCCC GGGTAACCTC GGAGCCTGTG
AGCAAGGCCT TTGGTCAGTG TGCATCCCAA CCCGCCTCTG TATGGAACGG TATCACCGCA
TACTGCTACG ATTGCACCAA CATTGATGGA TGTGGTTTTT GCGATGGCCA CTGCGTCCGT
GGCAACGAGC TGGCACCGTT GGATCTCAAC ATGTGTCCTA ACACCAGTGC CGAATCCTGG
GAGTTCCATA CTTGTCACAA CGCCTTTGGC TGGTTGTCCG TCTTTTTTAT GGTCGCCTAC
CTCTTCGCCT TTGGCGTTGG CATGGGTGGC TTGCCCTGGA CGATAAATTC GGAAATTTAT
CCCCTTCGAC ATCGGTCGCT GGCCGTCAGC TGCTCCACGG CAACCAACTG GATCGGTAAC
CTGATCGTGG CGGCAACCTT TTTATCGTTG AGTAGTCCCG CAACGTTGAC CACCTACGGT
GCTTTTTGGC TGTACGCCAG TGTGGCCATC GTCGGACTTC TGTGGTTATA CTTTGCTCTA
CCAGAAACCA AAGGATTGTC CTTAGAAGAT ATTGAAAAGT TATTTCGACG ACCAGGCGAC
GGATACGACG TCGTGAATAT GGACGATGAT GAGCCCGACG ATAGATTGCT AGACAATGGA
CTTGCGCACA GTACATCTTC GGACGATGAT GATAATGACG ACGGCGGTGG TTGCGATCAA
GAGGTACTGA ACACTCAGAA ACTAGAAAAC CAAGAATTGT CGGCGTGAGC AGCTCGCTGA
CCCCAGCGAT ACGGTTCAGC AATATATGTA CTACTTGTAT AGGAAACTCC AATAGATC
 
Protein sequence
MPLRRGANGG WQRISRAQVR REEAIAEAVR RTLELDSTPE YANDNAARKG TNAMNAQNPE 
GVYSDWASEG MRRVRADQVA RRMRHLTTMA ALGGFLFGYD TGVISGAMLM IRREFVLTPW
QQEVVVSSTV LSAFFSSIAG GSLNRVWGRR PCILLAAAVF TVGSLVLGGA WSYRTLVLGR
IIVGVGIGLA SLTTPMYIAE MAAPTFRGQL VTINALLVTI GQFVAGMVDG VFHGLLPETG
WRYMLGLATL PSMIMFLGFL ALPESPRWLA MNHRQEDATK VLQQYRETHL PASSPVDVTL
ITMNDQRFLR HFFDMLSDGP TRRALILGCG LMVVQQCSGI NTVMYYAASI YVMSGFAEST
AVWLSGFTAL AQVLGIAVSI VLVDRMGRRQ LVLGSLGAVA VSLLGLGLTF YLARVTSEPV
SKAFGQCASQ PASVWNGITA YCYDCTNIDG CGFCDGHCVR GNELAPLDLN MCPNTSAESW
EFHTCHNAFG WLSVFFMVAY LFAFGVGMGG LPWTINSEIY PLRHRSLAVS CSTATNWIGN
LIVAATFLSL SSPATLTTYG AFWLYASVAI VGLLWLYFAL PETKGLSLED IEKLFRRPGD
GYDVVNMDDD EPDDRLLDNG LAHSTSSDDD DNDDGGGCDQ EVLNTQKLEN QELSA