| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PHATRDRAFT_26921 |
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| Symbol | |
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| ID | 7199965 |
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| Type | CDS |
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| Is gene spliced | Yes |
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| Is pseudo gene | No |
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| Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_011674 |
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| Strand | + |
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| Start bp | 836262 |
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| End bp | 838014 |
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| Gene Length | 1753 bp |
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| Protein Length | 443 aa |
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| Translation table | |
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| GC content | 53% |
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| IMG OID | |
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| Product | beta chain succinyl-coa synthetase synthetase |
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| Protein accession | XP_002179303 |
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| Protein GI | 219117017 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.0876127 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | CATACACATA CACAGGGTCG ATTGGGTTCT CTTCCTTTGG AATTCCCCTC TCTCCCCCGC
TTCCGTATCG CCTTAGTCAC ATTCCCGATA CAAGACACGT TCCTTCCTTT CCCCCCCTTT
TCCAGTAACT CGTCCGTATG CTTTCTTCGA CCGTCGCTCG ATACGCTTTG CGTCGGACTG
CGAATCCCGC CGTCGGCGCC GTCCGCAATC TCAACGTACA CGAATATATT TCGATGGAAA
TCATGAAGAA CCACGGTATC CAAACACCGG AATGTTACGT AGCCAGCAAT CCGGAAGAAG
CCGAGAATAT CTTTTTGAAT TCATTGAATC GACGTAAGTC ACAGTGTGCC GTGTACGGTG
TCGGCGAGGG AAACACCGAC AGGGGGCGTG TCGCTGCAAT TGGAGACGTT GCTCGAGCGA
TACCGTGTGC ACGCACGTTT CGAGACTCAC CCATTTCCGT TCTTACTTGC CATTGCTCTT
TGTCCTTGTC TCTTGCCCTC TTCATATCCA GCCGGAGCTC CCAAAAAGGA TATCGTCATC
AAGGCCCAAG TGCTTTCGGG AGGTCGCGGC CTCGGAACCT TCAAGAACGG TTTCAAAGGC
GGGGTGCACA TGGTCACCAA GCCGGGTCAG GCTCGCGAGT TCGCCGCTGC CATGCTCGGC
AACGAGCTCG TCACCAAGCA AGCCCCCAAC GGCATTGTCT GTAATAAAGT ACTCTTGATG
GAACGCATGT ACATGCGTCG GGAAATGTAT TTGTCGATCC TGATGGACCG GGGGTCGCAA
GGACCGCTCT TGGTGGCCAG TCCGAGGGGC GGAACCTCCA TTGAGGACGT GGCCGCCACC
AACCCCGAAG TCATATTTAC CCAGCCCATT GACATTACCG AAGGTCTCAC GCCGGAGGGG
GCTCACCGCA TGGCGAGCAA TCTGGGTTTG GAAGAAGGTT CCACCGGACA CGACAAGGCG
GTCATACTCA TGCAGAATCT CTATAGCATG TTCATTGCCT GTGACTGTAC GCAAGTCGAG
GTCAACCCCT TGGCCGAAAC TCCGGAAGGC GACATTGTCG TCTGTGACGC CAAAGTCAAC
TTTGACGATA ACGCCGAATT CCGGCAGTCG TCGATCTTTG CCCGGCGGGA TACTTCTCAA
GAAGACGTCC GTGAAGTCGA CGCCAGCAAG TACGATCTCA ACTACATCGG ACTGGAGGGG
ACCATTGGCT GCATGGTCAA CGGAGCCGGC CTGGCCATGT CGACAATGGA CATTATCCAG
CTCAAGGGCG GGTCACCGGC CAACTTTTTG GACGTTGGCG GTGGGGCCAA CGAAACGCAG
GTCCAGAAAG CCTTTGAAAT TCTCAACTCG GATTCGCAGG TCAAAGCCAT CCTCGTCAAC
ATCTTTGGTG GGATTATGCG CTGTGACGTC ATTGCCACCG GAATCATTAA CGCGGCCAAA
GAAATCGGTA TCAACAAACC CATTGTCATT CGTCTGCAAG GCACCAACGT AAACGAAGCC
AAGACATTGA TTGAGGGTTG TGGGTTCCGT ATGATATTGG CAGAGGATCT GGAAGATGCG
GCCGAAAAGG CCGTCGGAGT GGCCGAGATT GCGGCCCAAG CCGAAAAGAT CCAGGTAGGC
GTCAAGTTTG AAGGCTTTTC GCTTTAAAAT GTCACAAGAG CCACACTGTG GGATACCTAT
ACGTCAAAGT TTACTCCGTA TCCCAATGAC GAACCATTTT GGCCTAGTTA AATTTACCAC
TTTTTGTTGG ATT
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| Protein sequence | MLSSTVARYA LRRTANPAVG AVRNLNVHEY ISMEIMKNHG IQTPECYVAS NPEEAENIFL
NSLNRPGAPK KDIVIKAQVL SGGRGLGTFK NGFKGGVHMV TKPGQAREFA AAMLGNELVT
KQAPNGIVCN KVLLMERMYM RREMYLSILM DRGSQGPLLV ASPRGGTSIE DVAATNPEVI
FTQPIDITEG LTPEGAHRMA SNLGLEEGST GHDKAVILMQ NLYSMFIACD CTQVEVNPLA
ETPEGDIVVC DAKVNFDDNA EFRQSSIFAR RDTSQEDVRE VDASKYDLNY IGLEGTIGCM
VNGAGLAMST MDIIQLKGGS PANFLDVGGG ANETQVQKAF EILNSDSQVK AILVNIFGGI
MRCDVIATGI INAAKEIGIN KPIVIRLQGT NVNEAKTLIE GCGFRMILAE DLEDAAEKAV
GVAEIAAQAE KIQVGVKFEG FSL
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