| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PHATRDRAFT_25422 |
|---|
| Symbol | |
|---|
| ID | 7197498 |
|---|
| Type | CDS |
|---|
| Is gene spliced | Yes |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
|---|
| Kingdom | Eukaryota |
|---|
| Replicon accession | NC_011670 |
|---|
| Strand | + |
|---|
| Start bp | 1061284 |
|---|
| End bp | 1062744 |
|---|
| Gene Length | 1461 bp |
|---|
| Protein Length | 374 aa |
|---|
| Translation table | |
|---|
| GC content | 48% |
|---|
| IMG OID | |
|---|
| Product | predicted protein |
|---|
| Protein accession | XP_002177744 |
|---|
| Protein GI | 219111985 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 33 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | CAGCTCCCGA GAGAGGCGAC CTCCTGCCTT AAACGCCGCT GTCTTGTCTG CAATTTGTTA
TCTTCGCCGT AGCCTTTCTT GTCAAAGTTC AAAAAATTGG AAAAGTTGCA GTGTGAATCA
TGACGTCAAA GCCGCCCCAT CCGATGGACG ACGAGTCTAT TGTAGACCCT CTACAGTGTC
CGCCTCTTCG CTGGGGGCTT ATCGGTTGCG GCCGCGTTTC GCATGACTTT ACACAAGCAC
TAAAGCACCT TCCATCAGCA AGCGTCGTTG CTTGTTCTGC ACGAGATGAG AATAGAGCGA
AAGAATTTGC CGATAAACAT GGAATTTCGA AGGCGTATGG AGATTACGAA AGGCTAATTG
CAGATAAGGA CGTTGACATT ATCGTAAGTT TATTGAGACA ACGGGGACGC AAATCGATGA
GGTTGAATCA TTGCTAACAA TGCACCGTGG ATTATGATCC AGTACGTTGG GAATCTACAC
GCTTTTCGTC GCTCTGTTGG AGAGCGCTGT TTGAAAGCGA ACAAGCACGT CCTCCTGGAG
AAGCCGTTTG CATGTACGGC CTTAGATGCT TCATATTTGA TTGGCCTTGC GAAGGAGAGA
AATTTGTTCC TAATGGAGGG TCAGTATCTG CTCTTACGAT AAGTCTGGAT TTAGCGTATT
GTATGACTCA CCTCCTTCTC CGGTGTACCG TTAGGAATGT GGACGCGTTT CTTTCCTGCG
TTTGAACAAG CTCGGCGTAT TGCTTTTGGC TCGAATGAGG GCGAAAGTAT TTTAGGTGAA
GTTGTGTCTG TCTTCTCAGA TTTTAACTTC AATGCTTCGG ATTCGGAAAT TTATCCCAGC
TCATTTGTCT ACAATAGAAA GTTAGGAGGA GGTGCTAGTC TATTGACGGG GCCATATCCC
ATTGCGGCAG CGACAGCTTT TTTTCCTGCT TCAACTCCGG ACAACATAAA AGTTGTTGGA
CAAGTCGATG AATTAACTGA GGTGGATTTG CAAGCGGCGG TTGCTTTATC TTTTCCTCCA
AACGGAACCC ATTCACCGGC TCTGGAGGGC AGCATTGACA GCAGCACCGC TGAATGTACT
CCGAAACTGC CGGGAAGTGG CGTGGCTACT CTAAGCTACG GAATGCTTGG TGAGAGCGTT
GAAGAAACTA CCGTTGTTGG TACGAAAGGT CGTTTGACGA TCAAAACTCC TGGTCATTGT
CCTACGAAGC TGATTGTGTC CTTGAAATCC ACCGGAAGAG CTGCTGCTTC CCAGACGATT
GAGTTTGATT TCCCTCTACC CAAGGACACG GATGATATCA AGACAGCGGG CGGATTCGTG
TACCCAAATA GTGCAGGCTT TTGCTACGAG GCTGCGGCTG TGGCGCGCTG CATAGCGTCG
GGAAAAACCG AGGCGCCACA GTATACCCTA GCTGAGACGA TGTTAGAGAT GGAAATTTTA
GATGAAGTTC GTAAGCAACT C
|
|---|
| Protein sequence | MTSKPPHPMD DESIVDPLQC PPLRWGLIGC GRVSHDFTQA LKHLPSASVV ACSARDENRA
KEFADKHGIS KAYGDYERLI ADKDVDIIYV GNLHAFRRSV GERCLKANKH VLLEKPFACT
ALDASYLIGL AKERNLFLME GMWTRFFPAF EQARRIAFGS NEGESILGEV VSVFSDFNFN
ASDSEIYPSS FVYNRKLGGG ASLLTGPYPI AAATAFFPAS TPDNIKVVGQ VDELTEGSID
SSTAECTPKL PGSGVATLSY GMLGESVEET TVVGTKGRLT IKTPGHCPTK LIVSLKSTGR
AAASQTIEFD FPLPKDTDDI KTAGGFVYPN SAGFCYEAAA VARCIASGKT EAPQYTLAET
MLEMEILDEV RKQL
|
|---|
| |