Gene PHATRDRAFT_2382 details

Gene Information

• Locus tag: PHATRDRAFT_2382
• Symbol: TRD5
• ID: 7198767
• Type: CDS
• Is gene spliced: Yes
• Is pseudo gene: No
• Organism name: Phaeodactylum tricornutum CCAP 1055/1
• Kingdom: Eukaryota
• Replicon accession: NC_011694
• Strand: +
• Start bp: 405055
• End bp: 412865
• Gene Length: 7811 bp
• Protein Length: 253 aa
• GC content: 57%
• Product: TRD5
• Protein accession: XP_002184873
• Protein GI: 219129390

Plasmid Coverage information

• Num covering plasmid clones: 3
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

GAAGGTACAC TACTCGGGAC GGCTGAGGGG CTTGTAGAGG GTACAGAAGT AGGCATTCGT 
GATGGATCCG TAGACGGTAC TGACGAAGGA GACATAGAAG GACTGCTGCT TGGTACCGAA 
GAGGGATTCT GGGAAGGGTT CTCCGACGGA GAAGAGGACG GTTGCACTGA CGGAACAGTC 
GAAGGCAATG CGCTAGGACT GTTTGATGGC AGCAAGCTCG GCTGCGCCGA CGGGACAGCC 
GTTGGGTTTC CGCTGGGTGT GGAAGAGGGA ATGCTACTCG GCCTGGCACT CGGCAACTCG 
GACGGGACTG CTGAGGGATC TCTTGAGGGT AGTAAGGATG GACTCGCAGA GGGAATGGCA 
GAAGGAGCTG AAGTTGGTTC GAGAGACGGC TGCGCCGATG GCTGCTGGGA GGGTTGACCG 
GAAGGCAGGC GGGAAGGCAC CAGCGAGGGG ACACTGGAGG GATCTCGTGA TGGAGAAACC 
GAGGGCAGTC GCGATGGCAC ATCCGTTGGA CTGGCTGATG GTAGTCTGGA CGGGCTTTCC 
GATGGTGACA ATGACGGCAT GGAGGACGCC AGGGGCGACA AGATCACACC GATGTATCGG 
ATTGTGGACG CAGTCTTGGT ATCCGCGTCA CCACCCGTTC CGTCGGCGGA ACTGTTGTTT 
GGCGCCAGGT CCGAGTTAGT AGCGTTCTCG GTGGAAACGA CTTCGACCTC AATACCGGCA 
CTTCCTAGAA ACATTCCCAC CAGGCCGATT CGCGGTTGAA ACTGCAGCAA GGTGGAATTC 
AAAAACAGAT CCAGCGCGAT TTCGCGGAGT TCGGGCGTGC CGAGGGTCGA GTTCACCGTG 
TATACGCCGG AACTGACCTC GGTAAAGGTT ACGCCTGGAA CAGTTCCCAG CGGGACCAGT 
TCACCAATGA GGTTGCCGCT GTCCATTGGT ACCCGTAATA TCACCGATAG AACTTCGGTG 
CCGTCCTGGT CGACACTACG ACCGGGATTC ACTCCGATCA AGCCAGGAGC GTTCTCTCGA 
AGGTTCAGCG GACTCACCAC CGTCACTGTT ACGTTGTCAG CGACCGCGAG GACCTCCACA 
GGAAAGGGAA AGGTTTGGTT GGAATTCGCA TTCATGGGAG TAGTACGTAC AGTGATATCC 
AGGATAAAGT CGGTGTCGGA TTGCGGTGGG CCAGTGAGAA TAATGCTGTT CAAAACCGCT 
CGTATCTGGG CCTCGTTCGC ACCAGGTACG TCGAACGTGC CTCCTGCTGG ATTCACAAAC 
GTCGCTGTTT GGGTGTTACC TGCGGGATCT ATGTACGTTA GCATTGTCCC GGGCGGAATG 
CTGGAGATGA CAATGTCGGC GATCTGGTCC GGTCGACCCG TGTCGATCAG TGAGACAGTG 
ATGTCGGGAC CGATAAGCTC TGGAACATCC TCAACGATAG TTGTAGACCC CGTGATGTTG 
ACGTTGAAGT CGAATACTGA CGGAGTTTGC GAAGGCAAAA GACTAGGAAT ATTTGATGGA 
TGACTGGTGG GCATTCTAGA CGGAGAAGAG GACGGTTGCA CTGACGGAAC AGTCGAAGGC 
AATGCGCTAG GACTGTTTGA TGGCAGCAAG CTCGGCTGCG CCGACGGGAT AGCCGTTGGG 
TTTCCGCTGG GTGTGGAAGA GGGAATGCTA CTCGGCCTGG CACTCGGTAA CTCGGACGGG 
ACTACTGAGG GATCTCGTGA GGGTAGTAAG GATGGACTCG CAGAGGGAAT GGCAGAAGGA 
GCTGAAGTTG GTTCGAGAGA CGGCTGCGCC GATGGCTGCT GGGAGGGTTG ACCGGAAGGC 
AGGCGGGAAG GCACCAGCGA GGGGACACTG GAGGGATCTC GTGATGGAGA AACCGAGGGC 
AGTCGCGATG GCACATCCGT TGGACTGGCT GATGGTAGTC TGGACGGGCT TTCCGATGGT 
GACAATGACG GCATGGAGGA CGCCAGGGGC GACAAGATCA CCCCGATGTA TCGGATTGTG 
GACGCAGTCT TGGTATCCGC GTCACCACCC GTTCCGTCGG CGGAACTGTT GTTTGGCGCC 
AGGTCCGAGT TAGTAGCGTT CTCGGTGGAA ACGACTTCGA CCTCAATACC GGCACTTCCT 
AGAAACATTC CCACCAGGCC GATTCGCGGT TGAAACTGCA GCAAGGTGGA ATTCAAAAAC 
AGATCCAGCG CGATTTCGCG GAGTTCGGGC GTGCCGAGGG TCGAGTTCAC CGTGTATACG 
CCGGAACTGA CCTCGGTAAA GGTTACGCCT GGAACAGTTC CCAGCGGGAC CAGTTCACCA 
ATGAGGTTGC CGCTGTCCAT TGGTACCCGT AATATCACCG ATAGAACTTC GGTGCCGTCC 
TGGTCGACAC TACGACCGGG ATTCACTCCG ATTAAGCCAG GAGCGTTCTC TCGAAGGTTC 
AGCGGACTCA CCACCGTGAC TGTTACGTTG TCAGCGACCG CGAGGACCTC CACAGGAAAG 
GGAAAGGTTT GGTTGGAATT CGCATTCATG GGAGTAGTAC GTACAGTGAT ATCCAGGATA 
AAGTCGGTGT CGGATTGCGG TGGGCCAGTG AGAATAATGC TGTTCAAAAC CGCTCGTATC 
TGGGCCTCGT TCGCACCAGG TACGTCGAAC GTGCCTCCTG CTGGATTCAC AAACGTCGCT 
GTTTGGGTGT TACCTGCGGG ATCTATGTAC GTTAGCATTG TCCCGGGCGG AATGCTGGAG 
ATGACAATGT CGGCGATCTG GTCCGGTCGA CCCGTGTCGA TCAGTGAGAC AGTGATGTCG 
GGACCGATAA GCTTTGGAAC ATCCTCAACG ATAGTTGTAG ACCCCGTGAT GTTGACGTTG 
AAGTCGAATA CTGACGGAGC TTGCGAGGGC ATGAGACTAG GCTGAGCTGA AGGTACACTA 
CTCGGGACGG CTGAGGGGCT TGTAGAGGGT ACAGAAGTAG GCATTCGTGA TGGATCCGTA 
GACGGTACTG ACGAAGGAGA CATAGAAGGA CTGCTGCTTG GTACCGAAGA GGGATTCTGG 
GAAGGGTTCT CCGACGGAGA AGAGGACGGT TGCACTGACG GAACAGTCGA AGGCAATGCG 
CTAGGACTGT TTGATGGCAG CAAGCTCGGC TGCGCCGACG GGATAGCCGT TGGGTTTCCG 
CTGGGTGTGG AAGAGGGAAT GCTACTCGGC CTGGCACTCG GCAACTCGGA CGGGACTGCT 
GAGGGATCTC TTGAGGGTAG TAAGGATGGA CTCGCAGAGG GAATGGCAGA AGGAGCTGAA 
GTTGGTTCGA GAGACGGCTG CGCCGATGGC TGCTGGGAGG GTTGACCGGA AGGCAGGCGG 
GAAGGCACCA GCGAGGGGAC ACTGGAGGGA TCTCGTGATG GAGAAACCGA GGGCAGTCGC 
GATGGCACAT CCGTTGGACT GGCTGATGGT AGTCTGGACG GGCTTTCCGA TGGTGACAAT 
GACGGCATGG AGGACGCCAG GGGCGACAAG ATCACACCGA TGTATCGGAT TGTGGACGCA 
GTCTTGGTAT CCGCGTCACC ACCCGTTCCG TCGGCGGAAC TGTTGTTTGG CGCCAGGTCC 
GAGTTAGTAG CGTTCTCGGT GGAAACGACT TCGACCTCAA TACCGGCACT TCCTAGAAAC 
ATTCCCACCA GGCCGATTCG CGGTTGAAAC TGCAGCAAGG TGGAATTCAA AAACAGATCC 
AGCGCGATTT CGCGGAGTTC GGGCGTGCCG AGGGTCGAGT TCACCGTGTA TACGCCGGAA 
CTGACCTCGG TAAAGGTTAC GCCTGGAACA GTTCCCAGCG GGACCAGTTC ACCAATGAGG 
TTGCCGCTGT CCATTGGTAC CCGTAATATC ACCGATAGAA CTTCGGTGCC GTCCTGGTCG 
ACACTACGAC CGGGATTCAC TCCGATTAAG CCAGGAGCGT TCTCTCGAAG GTTCAGCGGA 
CTCACACCGT GACTGTTACG TTGTCAGCGA CCGCGAGGAC CTCCACAGGA AAGGGAAAGG 
TTTGGTTGGA ATTCGCATTC ATGGGAGTAG TACGTACAGT GATATCCAGG ATAAAGTCGG 
TGTCGGATTG CGGTGGGCCA GTGAGAATAA TGCTGTTCAA AACCGCTCGT ATCTGGGCCT 
CGTTCGCACC AGGTACGTCG AACGTGCCTC CTGCTGGATT CACAAACGTC GCTGTTTGGG 
TGTTACCTGC GGGATCTATG TACGTTAGCA TTGTCCCGGG CGGAATGCTG GAGATGACAA 
TGTCGGCGAT CTGGTCCGGT CGACCCGTGT CGATCAGTGA GACAGTGATG TCGGGACCGA 
TAAGCTTTGG AACATCCTCA ACGATAGTTG TAGACCCCGT GATGTTGACG TTGAAGTCGA 
ATACTGACGG AGCTTGCGAG GGCATGAGAC TAGGCTGAGC TGAAGGTACA CTACTCGGGA 
CGGCTGAGGG GCTTGTAGAG GGTACAGAAG TAGGCATTCG TGATGGATCC GTAGACGGTA 
CTGACGAAGG AGACATAGAA GGACTGCTGC TTGGTACCGA AGAGGGATTC TGGGAAGGGT 
TCTCCGACGG AGAAGAGGAC GGTTGCACTG ACGGAACAGT CGAAGGCAAT GCGCTAGGAC 
TGTTTGATGG CAGCAAGCTC GGCTGCGCCG ACGGGATAGC CGTTGGGTTT CCGCTGGGTG 
TGGAAGAGGG AATGCTACTC GGCCTGGCAC TCGGCAACTC GGACGGGACT GCTGAGGGAT 
CTCTTGAGGG TAGTAAGGAT GGACTCGCAG AGGGAATGGC AGAAGGAGCT GAAGTTGGTT 
CGAGAGACGG CTGCGCCGAT GGCTGCTGGG AGGGTTGACC GGAAGGCAGG CGGGAAGGCA 
CCAGCGAGGG GACACTGGAG GGATCTCGTG ATGGAGAAAC CGAGGGCAGT CGCGATGGCA 
CATCCGTTGG ACTGGCTGAT GGTAGTCTGG ACGGGCTTTC CGATGGTGAC AATGACGGCA 
TGGAGGACGC CAGGGGCGAC AAGATCACCC CGATGTATCG GATTGTGGAC GCAGTCTTGG 
TATCCGCGTC ACCACCCGTT CCGTCGGCGG AACTGTTGTT TGGCGCCAGG TCCGAGTTAG 
TAGCGTTCTC GGTGGAAACG ACTTCGACCT CAATACCGGC ACTTCCTAGA AACATTCCCA 
CCAGGCCGAT TCGCGGTTGA AACTGCAGCA AGGTGGAATT CAAAAACAGA TCCAGCGCGA 
TTTCGCGGAG TTCGGGCGTG CCGAGGGTCG AGTTCACCGT GTATACGCCG GAACTGACCT 
CGGTAAAGGT TACGCCTGGA ACAGTTCCCA GCGGGACCAG TTCACCAATG AGGTTGCCGC 
TGTCCATTGG TACCCGTAAT ATCACCGATA GAACTTCGGT GCCGTCCTGG TCGACACTAC 
GACCGGGATT CACTCCGATC AAGCCAGGAG CGTTCTCTCG AAGGTTCAGC GGACTCACCA 
CCGTGACTGT TACGTTGTCA GCGACCGCGA GGACCTCCAC AGGAAAGGGA AAGGTTTGGT 
TGGAATTCGC ATTCATGGGA GTAGTACGTA CAGTGATATC CAGGATAAAG TCGGTGTCGG 
ATTGCGGTGG GCCAGTGAGA ATAATGCTGT TCAAAACCGC TCGTATCTGG GCCTCGTTCG 
CACCAGGTAC GTCGAACGTG CCTCCTGCTG GATTCACAAA CGTCGCTGTT TGGGTGTTAC 
CTGCGGGATC TATGTACGTT AGCATTGTCC CGGGCGGAAT GCTGGAGATG ACAATGTCGG 
CGATCTGGTC CGGTCGACCC GTGTCGATCA GTGAGACAGT GATGTCGGGA CCGATAAGCT 
CTGGAACATC CTCAACGATA GTTGTAGACC CCGTGATGTT GACGTTGAAG TCGAATACTG 
ACGGAGCTTG CGAGGGCATG AGACTAGGCT GAGCTGAAGG TACACTACTC GGGACGGCTG 
AGGGGCTTGT AGAGGGTACA GAAGTAGGCA TTCGTGATGG ATCCGTAGAC GGTACTGACG 
AAGGAGACAT AGAAGGACTG CTGCTTGGTA CCGAAGAGGG ATTCTGGGAA GGGTTCTCCG 
ACGGAGAAGA GGACGGTTGC ACTGACGGAA CAGTCGAAGG CAATGCGCTA GGACTGTTTG 
ATGGCAGCAA GCTCGGCTGC GCCGACGGGA CAGCCGTTGG GTTTCCGCTG GGTGTGGAAG 
AGGGAATGCT ACTCGGCCTG GCACTCGGCA ACTCGGACGG GACTGCTGAG GGATCTCGTG 
AGGGTAGTAA GGATGGACTC GCAGAGGGAA TGGCAGAAGG AGCTGAAGTT GGTTCGAGAG 
ACGGCTGCGC CGATGGCTGC TGGGAGGGTT GACCGGAAGG CAGGCGGGAA GGCACCAGCG 
AGGGGACACT GGAGGGATCT CGTGATGGAG AAACCGAGGG CAGTCGCGAT GGCACATCCG 
TTGGACTGGC TGATGGTAGT CTGGACGGGC TTTCCGATGG TGACAATGAC GGCATGGAGG 
ACGCCAGGGG CGACAAGATC ACCCCGATGT ATCGGATTGT GGACGCAGTC TTGGTATCCG 
CGTCACCACC CGTTCCGTCG GCGGAACTGT TGTTTGGCGC CAGGTCCGAG TTAGTAGCGT 
TCTCGGTGGA AACGACTTCG ACCTCAATAC CGGCACTTCC TAGAAACATT CCCACCAGGC 
CGATTCGCGG TTGAAACTGC AGCAAGGTGG AATTCAAAAA CAGATCCAGC GCGATTTCGC 
GGAGTTCGGG CGTGCCGAGG GTCGAGTTCA CCGTGTATAC GCCGGAACTG ACCTCGGTAA 
AGGTTACGCC TGGAACAGTT CCCAGCGGGA CCAGTTCACC AATGAGGTTG CCGCTGTCCA 
TTGGTACCCG TAATATCACC GATAGAACTT CGGTGCCGTC CTGGTCGACA CTACGACCGG 
GATTCACTCC GATTAAGCCA GGAGCGTTCT CTCGAAGGTT CAGCGGACTC ACCACCGTGA 
CTGTTACGTT GTCAGCGACC GCGAGGACCT CCACAGGAAA GGGAAAGGTT TGGTTGGAAT 
TCGCATTCAT GGGAGTAGTA CGTACAGTGA TATCCAGGAT AAAGTCGGTG TCGGATTGCG 
GTGGGCCAGT GAGAATAATG CTGTTCAAAA CCGCTCGTAT CTGGGCCTCG TTCGCACCAG 
GTACGTCGAA CGTGCCTCCT GCTGGATTCA CAAACGTCGC TGTTTGGGTG TTACCTGCGG 
GATCTATGTA CGTTAGCATT GTCCCGGGCG GAATGCTGGA GATGACAATG TCGGCGATCT 
GGTCCGGTCG ACCCGTGTCG ATCAGTGAGA CAGTGATGTC GGGACCGATA AGCTTTGGAA 
CATCCTCAAC GATAGTTGTA GACCCCGTGA TGTTGACGTT GAAGTCGAAT ACTGACGGAG 
CTTGCGAGGG CATGAGACTA GGCTGAGCTG AAGGTACACT ACTCGGGACG GCTGAGGGGC 
TTGTAGAGGG TACAGAAGTA GGCATTCGTG ATGGATCCGT AGACGGTACT GACGAAGGAG 
ACATAGAAGG ACTGCTGCTT GGTACCGAAG AGGGATTCTG GGAAGGGTTC TCCGACGGAG 
AAGAGGACGG TTGCACTGAC GGAACAGTCG AAGGCAATGC GCTAGGACTG TTTGATGGCA 
GCAAGCTCGG CTGCGCCGAC GGGACAGCCG TTGGGTTTCC GCTGGGTGTG GAAGAGGGAA 
TGCTACTCGG CCTGGCACTC GGCAACTCGG ACGGGACTGC TGAGGGATCT CGTGAGGGCA 
ATAACGTTGG CAGTGCTGAA GGCAAGAGAC TAGGAAGCGA GGAAGGAAGT AGACTCGGTT 
CCTCGGAAGG TTTCCAGGTA GGATCGGTTG ATGGGTTTTT TGAAGGCGAG ATCGACGGCA 
ACCTTGTGGG G 

 

Protein sequence

GFSDGEEDGC TDGTVEGNAL GLFDGSKLGC ADGTAVGFPL GVEEGMLLGL ALGNSDGTAE 
GSLEGSKDGL AEGMAEGAED GCTDGTVEGN ALGLFDGSKL GCADGTAVGF PLGVEEGMLL 
GLALGNSDGT AEGSREGSKD GLAEGMAEGA EDGCTDGTVE GNALGLFDGS KLGCADGTAV 
GFPLGVEEGM LLGLALGNSD GTAEGSREGN NVGSAEGKRL GSEEGSRLGS SEGFQVGSVD 
GFFEGEIDGN LVG