| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PHATRDRAFT_23709 |
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| Symbol | |
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| ID | 7198752 |
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| Type | CDS |
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| Is gene spliced | Yes |
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| Is pseudo gene | No |
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| Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_011694 |
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| Strand | - |
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| Start bp | 287054 |
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| End bp | 288606 |
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| Gene Length | 1553 bp |
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| Protein Length | 327 aa |
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| Translation table | |
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| GC content | 56% |
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| IMG OID | |
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| Product | predicted protein |
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| Protein accession | XP_002184938 |
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| Protein GI | 219129526 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.00469495 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GCGTCAACTT TCTTCGAAAT CGGTATTCGT TCGTATCGAT ACGTGTCGAG TACCTTCGCA
ATCACTACTA GACAAACACA GCAACACAGC AACACCCAGC AGTATTCTGG CACGCTTAAA
CTACACACAC ACACACCCAC ACACTCCATC ATCATGAGTA CTCGTTCGAA CCTTCAACCG
ACGTCAACAC CGCCCGCTCC CACGCCGCCG ACGAAAAAGC ACCCCTTACA GCACTTGATT
GCGGGAGGAT GTGCCGGTCT CGTCGAGTCG TCCGTCTGTC ATCCACTGGA CACCATCAAG
ACCCGCATGC AACTGCGTCG GCAAACCACG TCGGTGGAAA AGGTCGTCGT CAAGGTCCGC
AACAGTCTCG TCGAACCGGC CTTGCGGCTG CAACACTCGC TCCGGGAGCC GCTGCTGCGT
ACGCAGCGCT TCCACGAACC CGGCTGGCAA ACGATTCCGT CCGCCACGAG GACTGGCGGC
GGTGCGACCG TCACCGAAGT GGTGCGCCTT TCGCCACAAG CGCGAGCCGC CGCCGGCGTC
GTGCAGGCAC CCTTGGGACC CATCGGCACC GCCCGACGCA TCGTGCAGCG GGAAGGACTC
CTCGCACTCT ACAAGGGACT CACGGCCGTT TATACCGGAA TCGTTCCCAA AATGGCCATC
CGATTCGTAT CGTTCGAGCA GTATCGGGAG TTCCTCACGG CTCGCTTGGG AAACGCCGAC
AAGTCCAACG CGACGCAGAT TACCTTCACG GCGGGGCTGT TCTCCGGTTT GACCGAAGCC
GTCCTCGTTG TCACCCCCGC CGAAGTCTGC AAAATTCGGA TGCAGTCGCA GTATCACTCC
ATGATGGATC CGACCGCTAT GCAGCACCGC AAGTACACCA ATGTCCTGCA GACGGCCATG
CTCATTGTCA AGGAAGAAGG CGCGGGCGCG CTCTACAAGG GCGTGGTACC CACCATGCTG
CGCCAAGGTT GCAACCAAGC CGTCAACTTT ACGGCTTACA GTGCCATTAA ACAGCAAGTC
ATGCAATGGC AAGGTACCGA TAGTTTGGCG TCTTGGCAGA GTCTACTCAT TGGAGGCTTG
TCGGGTGGTA TGGGTCCCGT CGTGAACAAC CCCCTGGACG TGTAAGTGTC TACTGGTTCA
TTTTATAAAC ACACGTGTGT GTGATGGGGC ATGCTCGTTG GATCACGCTC GTTTGTCCAC
CGTATCGTCT CCTGGATTTG TAGCTCACAC GTTTTGTGTT TTTGTTCCAT TTCAATATGT
GAAAACGTCC ATCCGGACCA CGGCGACAAT GCTGTTGTTG TTGTTGATGG TGATACAGGG
TCAAGACACG TTTGCAGAAA CAGGTTGTGG CGGCGGGCAA GCCAGCCAAG TATACCGGGT
TGGCGCAGGC GTGCGTCGTC ATTGCGAAAG AAGAAGGTGT CTTGGCGCTC TGGAAGGGCA
TCACCCCCCG ATTGATGCGC ATCATGCCGG GTCAGGCCAT TACCTTTATG ACCTACGAAG
CCGTCTCGGC ACAAATGACA CAATGGGGCT TGTTTGGACA GTAGTTTTTT CCC
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| Protein sequence | MSTRSNLQPT STPPAPTPPT KKHPLQHLIA GGCAGLVESS VCHPLDTIKT RMQLPAAGVV
QAPLGPIGTA RRIVQREGLL ALYKGLTAVY TGIVPKMAIR FVSFEQYREF LTARLGNADK
SNATQITFTA GLFSGLTEAV LVVTPAEVCK IRMQSQYHSM MDPTAMQHRK YTNVLQTAML
IVKEEGAGAL YKGVVPTMLR QGCNQAVNFT AYSAIKQQVM QWQGTDSLAS WQSLLIGGLS
GGMGPVVNNP LDVVKTRLQK QVVAAGKPAK YTGLAQACVV IAKEEGVLAL WKGITPRLMR
IMPGQAITFM TYEAVSAQMT QWGLFGQ
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