Gene PHATRDRAFT_231 details

Gene Information

• Locus tag: PHATRDRAFT_231
• ID: 7201612
• Type: CDS
• Is gene spliced: Yes
• Is pseudo gene: No
• Organism name: Phaeodactylum tricornutum CCAP 1055/1
• Kingdom: Eukaryota
• Replicon accession: NC_011678
• Strand: -
• Start bp: 38474
• End bp: 41667
• Gene Length: 3194 bp
• Protein Length: 970 aa
• GC content: 50%
• Product: predicted protein
• Protein accession: XP_002180935
• Protein GI: 219120392

Plasmid Coverage information

• Num covering plasmid clones: 15
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

GATCCGGAAG TGCGCGCCGA GCGGGAGCGA GTGCGGGAAG AACAACGACA GGAAACGGAA 
GAACGACGCG CCAAGAAACG GCAAGCGGAA CAGGCTTTGG CCAACAAACA CCGGAAACTC 
GACAAGGAAG AAGCTCGCAA GGCACAAGCG CGCTTGGAAT ATCTGTTGCA GCAGAGTTCC 
ATTTTTGCGA AACTGCAGGG TGGATCCGGT GCCATTCCGC AGGGACCGGA CGAGGCCAAA 
GACCAGGAGA CCGCGGCCGC CGCGGCAAAG TCGAAAAAAA AGCGCACGTC CACCGCGTCG 
CCGAGCTCTA ACAAGGCACA CCATCGACAC GGGGCCGAGT CCAACGACGA CTCGAATGAA 
GAGGAAGAAG CCGACGAAAC AGAAGTCGGA CACGTCTTTT TGACCAAGCA ACCCACTTCG 
ATCAAGTTTG GTACCCTGAA GCCCTACCAG CTCGAAGCTT TGAACTGGAT GATTCATCTT 
TCCGAAAAAG GGCTGAACGG GATTCTCGCT GACGAAATGG GTTTGGGGAA GACCTTGCAA 
TCCATTTCCG TCCTTGCGTA TCACTGGGAA TTTCTACGCA TACAGGGACC ACATCTGATC 
TGTGTCCCCA AATCTACGCT TTCCAATTGG ATGAACGAAC TTAAACGTTG GTGCCCGTCG 
CTTCGGGCCA TCAAGTTCCA CGGCTCGCGG GAAGAAAGGG AATATATGAT TGACAACATG 
TTTCACAACG AAGCAGCCAC GCACGATGGT CGTCGACCGG ATCGACAAAT TATGGACGGA 
TCGGGCGAAT TGATCGACGA CAATACCGAC ACACCGCGTC CCTGGGATGT CTGCGTAACT 
ACCTACGAAG TCGCCAACGC GGAACGCAAA ACTTTGCAGA AGTTCACGTG GAAATACCTC 
GTAATCGACG AAGCCCACCG ACTCAAGAAC GATGCTTCCA TGTTCAGCAA GACGGTTCGG 
TCGTTCCGGA CGTCGAATCG CTTGCTCTTG ACGGGGTACG TGCTGGTCGT TTAATTTTTG 
GCGTTGCTGG AGTTGTAGAA GCGTGGCGTT ACGGTTTTCT CACACCTCTG TATTTTCACA 
CCAATTTTTA CCTACAGCAC TCCGTTACAG AACAACCTCC ACGAGCTTTG GGCTTTGCTC 
AATTTCTTGT TGCCCGATAT CTTTTCGTCG GCGGACCAAT TTGACGAATG GTTTGATCTG 
GAAATTGACG ATGAAGAAGC CAAAAAGAAC ATGATTTCGC AGTTGCACAA GATTTTACGT 
CCGTTCATGT TGCGTCGTCT GAAAGCTGAT GTGGCCAAAG GGTTGCCACC GAAAACGGAA 
ACCATTCTCA TGGTTGGAAT GTCCAAAATC CAGAAACAGC TCTACAAAAA GCTCCTCTTG 
CGTGATTTGG ATAGTATCAC GGGCAAAGTC TCGGGCAAGA ACAGAACCGC CGTTCTCAAC 
ATTGTCATGC AGTTGCGGAA GTGCTGCGGT CACCCGTATT TGTTCGAAGG AGTCGAAGAC 
CGGACTTTGG ATCCACTTGG AGAGCATTTG GTCGAGAATT GTGGAAAGTT GAGCATGGTC 
GACAAGCTAC TCAAGCGATT GAAGAGCCGT GGGAGCCGTG TTTTGATCTT TACTCAAATG 
ACGCGCGTGC TCGATATTCT TGAGGATTTT ATGGTTATGC GTGGATACCA ATATTGTCGC 
ATTGACGGCA ACACCAATTA CGATGACCGC GAGAGCTCCA TTGACGAATT TAATCGGGAA 
GGCACCGATA AGTTTTGTTT CTTGTTGTCG ACCCGTGCGG GAGGTCTCGG AATTAACCTG 
CAGACAGCCG ACACGTGCAT CTTGTATGAT TCGGACTGGA ACCCACAACA AGACTTGCAA 
GCCCAGGATC GCTGTCATCG CCTTGGACAA AAGAAACCAG TCAATGTGTT TCGTTTGGTC 
TCTGAGAATA CTGTTGAAGA AAAGATTGTG GAACGCGCTC AGCAAAAGCT CAAGCTGGAC 
GCAATGGTTG TGCAGCAAGG GCGACTGAAA GATCAAGACA AGGTGACCAA GGACGAAATC 
ATGGCCGCCG TTCGATTTGG TGCGGATACG GTCTTTCGAT CCGAAGAGTC TACAATCACC 
GATGACGATA TTGACGTGAT TTTGGAGCGT GGGTACGTGG TAGCAGGTCG GGTTGAGAGT 
ACCACAAGCG GACGCGAAGG ATGCCGGAGA ATCTTCTGAC ACAGTTTCAT CTTTTCTTTT 
CTTCGTCTTT CAGAGCGGCC AAGACCAAGG AGCTTGCCGA AAAGATCCAG ACACGGGACA 
AAGGCGATCT TCTGGACTTT CGCCTGGACG GGGGAATATC AGCGCAGACG TTCGAGGGCG 
TGGATTACAG TGACAAAGAT CTACGCGATC ATCTCCGCAT GCTAGCTGCA GATTCAATGG 
GAAAGCGAGA ACGCCGACCG CCTCCCACGA GCTATAATCC TATCATCATA TCGAAGAAGT 
CAATGGTGGT AAATAATCGC CGGATCAAAC TACCTAAATG TCTACGTATT CCACAAATGG 
AAGACCATCA TTTTTACAAT CGCGAACGCC TCTTGGACTT GGGAAGGCTT GAGTTCGAGA 
CTTACGCTGC GCTTAGAGAG GCTGGTGAGC TTCCACCGAA AGAGTTTATG GAACGGAAGA 
GGACGTTGTT ACCCGACGAG CTGGGACAAG AAAAGCTAGA GCTCTTGGCT GAAGGATTTG 
GGGACTGGAG TAGAAGTCAA TATTACGCCT TTGTCAAGGC AGCTGCGAAG TATGGGCGTG 
ATGACATCAG TGGCATCGCC AACGAGTTGG ACATGCCAGA AGTCGAAATC GCTGCTTACA 
GTAAATCATT TTGGGCCTAT GGACCGACTG AACTCGAAAG CGAGTGGGAA CGCCTCGTTG 
GTAATATCGA CCGAGGGGAA AAGAAGCTGG CGAAGCAAAA GAAACTCAAG TCTCTCCTCG 
CAAAGTTCGT TAACACTTTT GAAAACCCTA GAGATGATAT GGTCTTTGCT AATAAAGGAA 
CCACTCCCTT TGCTCTAGAG CAGGATCGAG CACTGCTATC TGCCGTCGAC AAACACGGAT 
ACGGTAATTG GGATTCCGTC CGCGAGGAGA TTCGCACTGA TGGACGTCTC AAATTTCAGC 
ATTCAACCCA AGGTATGACA GTACAGGCAA TTGGGAAGCG CTGCGATTAC CGAATGAGGC 
AAATGGAAAA GGAA 

 

Protein sequence

DPEVRAERER VREEQRQETE ERRAKKRQAE QALANKHRKL DKEEARKAQA RLEYLLQQSS 
IFAKLQGQRP GDRGRRGKAH HRHGAESNDD SNEEEEADET EVGHVFLTKQ PTSIKFGTLK 
PYQLEALNWM IHLSEKGLNG ILADEMGLGK TLQSISVLAY HWEFLRIQGP HLICVPKSTL 
SNWMNELKRW CPSLRAIKFH GSREEREYMI DNMFHNEAAT HDGRRPDRQI MDGSGELIDD 
NTDTPRPWDV CVTTYEVANA ERKTLQKFTW KYLVIDEAHR LKNDASMFSK TVRSFRTSNR 
LLLTGTPLQN NLHELWALLN FLLPDIFSSA DQFDEWFDLE IDDEEAKKNM ISQLHKILRP 
FMLRRLKADV AKGLPPKTET ILMVGMSKIQ KQLYKKLLLR DLDSITGKVS GKNRTAVLNI 
VMQLRKCCGH PYLFEGVEDR TLDPLGEHLV ENCGKLSMVD KLLKRLKSRG SRVLIFTQMT 
RVLDILEDFM VMRGYQYCRI DGNTNYDDRE SSIDEFNREG TDKFCFLLST RAGGLGINLQ 
TADTCILYDS DWNPQQDLQA QDRCHRLGQK KPVNVFRLVS ENTVEEKIVE RAQQKLKLDA 
MVVQQGRLKD QDKVTKDEIM AAVRFGADTV FRSEESTITD DDIDVILERG AAKTKELAEK 
IQTRDKGDLL DFRLDGGISA QTFEGVDYSD KDLRDHLRML AADSMGKRER RPPPTSYNPI 
IISKKSMVVN NRRIKLPKCL RIPQMEDHHF YNRERLLDLG RLEFETYAAL REAGELPPKE 
FMERKRTLLP DELGQEKLEL LAEGFGDWSR SQYYAFVKAA AKYGRDDISG IANELDMPEV 
EIAAYSKSFW AYGPTELESE WERLVGNIDR GEKKLAKQKK LKSLLAKFVN TFENPRDDMV 
FANKGTTPFA LEQDRALLSA VDKHGYGNWD SVREEIRTDG RLKFQHSTQG MTVQAIGKRC 
DYRMRQMEKE