Gene PHATRDRAFT_22411 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPHATRDRAFT_22411 
Symbol 
ID7203593 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePhaeodactylum tricornutum CCAP 1055/1 
KingdomEukaryota 
Replicon accessionNC_011685 
Strand
Start bp339705 
End bp340726 
Gene Length1022 bp 
Protein Length321 aa 
Translation table 
GC content53% 
IMG OID 
Productpredicted protein 
Protein accessionXP_002182820 
Protein GI219125087 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.339546 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
CATGAACACG AGAAGCCCCG CAACTACGTT AGAAACGAGC AGGCCTTCGA CTCGTGCTCC 
TACCGGCAAT AATGAGAATA CTGAGAGTGA TTTGGAGCCG CCGCTAGCAT CGCTATCCCT
ATCTACCAAA GGTCGTTACT TTGTTGTTAC CGGAGGGACA CAGGGATTGG GTTTGGCGAT
TGCCATTCAA CTCAAAAAAG CGGGCGCCGC TGGACTCTTC TTGGTCGCCC GATCACCCGA
CAAGGGTCAA GCGGCGGTTG AACACCTACG CCAACAGCAC CAGTTGGGAG ACGACGGTAA
ATCGACTTGT CAAGTCTTTT TTCTACCCAC CGACTTGTCT GATACGAAGC AAGTGCAAAC
CGTATTTTCT CGGATTGAAG ACCTCTTGTC AACTACCGAT GTTGTCAGTG GTCTCGTAAA
CGCCGCCGCT ATAACGACAC GGGGCAATCT GTTTACCACC ACGTCGAACG AGTTTGACAC
GCAGTTTTTC GTGAACGTAC GCGCCCCCTT TTTGTTGACT CAAGCCTTGG CGGTTCATTG
TCGAAAGCAG CAGACACAAA GAACGTCACA AGTGCGGGCC AGCATCGTCA ACATTTCCAG
TGTCGCCGCG TACGGTGGCG CGCCGTTCAT TACAGCCTAC TCGGCGAGCA AGGCCGCACT
CTCCACTCTA ACCAAAACTA ACGCGGCTGA GCTCGCGCCT CATGGAATTC GTGTGAATGC
CATTCAATTG GGATGGACCT ATACGGATAA CGAAGATGCA TTGCAGACGG CCCAATCGGA
TCGGGATTGG ATCCAGCGAG CCGACGAAGG TGTGCCGTTA GGACGCATTT TGCGACCCCA
CGATGTCGCC GTGACGGTTG TGTTTTTGTT GTCCGAAGCA TCGGCCATGA CGACGGGGAC
TTTAGTGGAT CTGCATCCGG AGTATGCTCA CGGTCTTATT TCGCTGGCAC CGACTGATGC
CCGTTAATCC AGACTGCTCT ACAAAAGCTC AGCATACGAT GGCCTCCGCG CGACTTTTTA
AC
 
Protein sequence
MNTRSPATTL ETSRPSTRAP TGNNENTESD LEPPLASLSL STKGRYFVVT GGTQGLGLAI 
AIQLKKAGAA GLFLVARSPD KGQAAVEHLR QQHQLGDDGK STCQVFFLPT DLSDTKQVQT
VFSRIEDLLS TTDVVSGLVN AAAITTRGNL FTTTSNEFDT QFFVNVRAPF LLTQALAVHC
RKQQTQRTSQ VRASIVNISS VAAYGGAPFI TAYSASKAAL STLTKTNAAE LAPHGIRVNA
IQLGWTYTDN EDALQTAQSD RDWIQRADEG VPLGRILRPH DVAVTVVFLL SEASAMTTGT
LVDLHPEYAH GLISLAPTDA R