Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PHATRDRAFT_22411 |
Symbol | |
ID | 7203593 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
Kingdom | Eukaryota |
Replicon accession | NC_011685 |
Strand | + |
Start bp | 339705 |
End bp | 340726 |
Gene Length | 1022 bp |
Protein Length | 321 aa |
Translation table | |
GC content | 53% |
IMG OID | |
Product | predicted protein |
Protein accession | XP_002182820 |
Protein GI | 219125087 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 0.339546 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | CATGAACACG AGAAGCCCCG CAACTACGTT AGAAACGAGC AGGCCTTCGA CTCGTGCTCC TACCGGCAAT AATGAGAATA CTGAGAGTGA TTTGGAGCCG CCGCTAGCAT CGCTATCCCT ATCTACCAAA GGTCGTTACT TTGTTGTTAC CGGAGGGACA CAGGGATTGG GTTTGGCGAT TGCCATTCAA CTCAAAAAAG CGGGCGCCGC TGGACTCTTC TTGGTCGCCC GATCACCCGA CAAGGGTCAA GCGGCGGTTG AACACCTACG CCAACAGCAC CAGTTGGGAG ACGACGGTAA ATCGACTTGT CAAGTCTTTT TTCTACCCAC CGACTTGTCT GATACGAAGC AAGTGCAAAC CGTATTTTCT CGGATTGAAG ACCTCTTGTC AACTACCGAT GTTGTCAGTG GTCTCGTAAA CGCCGCCGCT ATAACGACAC GGGGCAATCT GTTTACCACC ACGTCGAACG AGTTTGACAC GCAGTTTTTC GTGAACGTAC GCGCCCCCTT TTTGTTGACT CAAGCCTTGG CGGTTCATTG TCGAAAGCAG CAGACACAAA GAACGTCACA AGTGCGGGCC AGCATCGTCA ACATTTCCAG TGTCGCCGCG TACGGTGGCG CGCCGTTCAT TACAGCCTAC TCGGCGAGCA AGGCCGCACT CTCCACTCTA ACCAAAACTA ACGCGGCTGA GCTCGCGCCT CATGGAATTC GTGTGAATGC CATTCAATTG GGATGGACCT ATACGGATAA CGAAGATGCA TTGCAGACGG CCCAATCGGA TCGGGATTGG ATCCAGCGAG CCGACGAAGG TGTGCCGTTA GGACGCATTT TGCGACCCCA CGATGTCGCC GTGACGGTTG TGTTTTTGTT GTCCGAAGCA TCGGCCATGA CGACGGGGAC TTTAGTGGAT CTGCATCCGG AGTATGCTCA CGGTCTTATT TCGCTGGCAC CGACTGATGC CCGTTAATCC AGACTGCTCT ACAAAAGCTC AGCATACGAT GGCCTCCGCG CGACTTTTTA AC
|
Protein sequence | MNTRSPATTL ETSRPSTRAP TGNNENTESD LEPPLASLSL STKGRYFVVT GGTQGLGLAI AIQLKKAGAA GLFLVARSPD KGQAAVEHLR QQHQLGDDGK STCQVFFLPT DLSDTKQVQT VFSRIEDLLS TTDVVSGLVN AAAITTRGNL FTTTSNEFDT QFFVNVRAPF LLTQALAVHC RKQQTQRTSQ VRASIVNISS VAAYGGAPFI TAYSASKAAL STLTKTNAAE LAPHGIRVNA IQLGWTYTDN EDALQTAQSD RDWIQRADEG VPLGRILRPH DVAVTVVFLL SEASAMTTGT LVDLHPEYAH GLISLAPTDA R
|
| |