Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PHATRDRAFT_2215 |
Symbol | |
ID | 7195131 |
Type | CDS |
Is gene spliced | Yes |
Is pseudo gene | No |
Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
Kingdom | Eukaryota |
Replicon accession | NC_011687 |
Strand | + |
Start bp | 390702 |
End bp | 392006 |
Gene Length | 1305 bp |
Protein Length | 415 aa |
Translation table | |
GC content | 55% |
IMG OID | |
Product | predicted protein |
Protein accession | XP_002183353 |
Protein GI | 219126206 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 29 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTATTCATTG TTACCACCGC GGCCTTGCCC TGGATGACGG GAACCGCCGT CAACCCATTG CTCCGGGCAG CCTACCTAAC TCTGCGTAAC GCTGCTCGCT GTCCACATCA GGATTGCGAC GGAACCAACA ATAGTAGCAA CGCCATCACC AATAAAACCA ACACAAACAC GACGGTCACG CTGGTCATTC CGTGGTTGGA GTCCGCCGCG GATCGAGTCT TGCTCTACGG CGACGCTTGG AAACACGCCA CCACCGCCGT ACAGGAAACA TTCATACGCG AATGGCTCGT CACCCGTGCC AGCCTAACCT CCCAACAAGC TCACAGTGTG GTCATTGTCT TTTACCCCGC CCGCTACCAT CACGGACTTT CCAGTATCTT TGCCATGGGC GATTTCTGCG AACGACTCAC CGTACCGGAC GACGCCGTCT GTTTACTGGA AGAACCCGAA CACATCAATT GCTACCGGGC TCCGGGCAAA ACATCCTGGC GGAAAAAATT TGCTCACGTC GTGGGGATTA TCCACACTAA CTACAAAGCC TACGCCTCTC ACCACTACAG TGGTTTGCTT ACCGGACCCT TGGTCGGGGT GTTGTCCAGT TGGTGTGTAC GGGCCTATTG CGATAAGGTC ATCAAGTTAA GCCCGGTTCT GCAAACCTAC GCGGCCGAAA AGGAAACTGT TTGCAACGTC CACGGAATAC GGGACGAGTT TTTGCACACG CCGGCACCGA CCGGTCCCAA AATTTATTTC TTGGGAAAGC TACTGTGGGC CAAGGGACTG GACAAGATGT TGAGGTTGCA GTATGCCTAC CGCAAAGCGA CCGGATCGTA CTTTGCCATG GACGTCTTTG GGAGCGGGCC GGAGGAAAAG GAAATACGAA AAGCATTCTT GGGAGAAGCA CTGGAAGACG ACGATGTTTC CTCGGTGGGG AGCAAGTCCA CTTTTTGGAA ACGACGGGTT CCCTTACCGG TACAGTTTTT GGGCCGTCAA GACCACGGGA CCATTTCGAC GGACTACAAA ATCATGGTCA ATCCGAGTAT CACCGAAGTG CTGTGCACGT CGACGGCCGA AGCTGTTGCC ATGTCCAAGT TTGTCATTCT ACCTACCCAC CCGTCGAACG TATTTTTTGA ACAGTTCCCC AACTGTCTCT TTTACGAAAC ACCCGCCGAC TTTTGCCGTG TCCTGCAACA CGCCACGTCG CACAATCCGG AACCCCTGAC ACCGGAGTGC CGAGACGTAC TAAGCTGGTC CGCCGCCACA ACACGCTTAC TGGAGGCGGG GCAAGTGTCG GAACGGGACG CCGCC
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Protein sequence | VFIVTTAALP WMTGTAVNPL LRAAYLTLRN AARCPHQDCD GTNNSSNAIT NKTNTNTTVT LVIPWLESAA DRVLLYGDAW KHATTAVQET FIREWLVTRA SLTSQQAHSV VIVFYPARYH HGLSSIFAMG DFCERLTVPD DAVCLLEEPE HINCYRAPGK TSWRKKFAHV VGIIHTNYKA YASHHYSGLL TGPLVGVLSS WCVRAYCDKV IKLSPVLQTY AAEKETVCNV HGIRDEFLHT PAPTGPKIYF LGKLLWAKGL DKMLRLQYAY RKATGSYFAM DVFGSGPEEK EIRKAFLGEA LEDDDFLGRQ DHGTISTDYK IMVNPSITEV LCTSTAEAVA MSKFVILPTH PSNVFFEQFP NCLFYETPAD FCRVLQHATS HNPEPLTPEC RDVLSWSAAT TRLLEAGQVS ERDAA
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