Gene PHATRDRAFT_18274 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPHATRDRAFT_18274 
Symbol 
ID7197487 
TypeCDS 
Is gene splicedYes 
Is pseudo geneNo 
Organism namePhaeodactylum tricornutum CCAP 1055/1 
KingdomEukaryota 
Replicon accessionNC_011670 
Strand
Start bp989242 
End bp990327 
Gene Length1086 bp 
Protein Length173 aa 
Translation table 
GC content47% 
IMG OID 
Productpredicted protein 
Protein accessionXP_002178047 
Protein GI219112591 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGTCAGA ATCCGGTCGT GTTCTTTGAT GTTACCATAG GCGGATCGGC AAAGGTGTGT 
TTTCAGAGCC GTTTCCTTGG ATAGTAGTAA TGTCTGCCGA AAGCCATGGA GGAGGGCAGC
TCGCCGGTCG GCACCATGTG ATGTCTCTTC TCTGACCGTG TACAAAAATA ACAACCAGGG
TCGGATAGAA ATGGAGCTCA GAGCAGATGT TGTCCCCAAG ACGGCTGAAA ATTTTAGGTG
CCTCTGTACG GGCGAGAAGG GTATCGGAAA ATTGGGGAAG CCTCTGCATT TTAAGGGATC
AGCTTTTCAT CGTGTGGTAC GTACGAGCTA ATGCGGGAAT CTGTGTTCAC AAGAAATCCT
ACCTTTTGGA CGAATTACGG CGTAGTCTTA CAGTCTCGTT CTTATTCACA AGATACCAAA
CTTTATGGCC CAAGGGTACG TTCGGTAGAT AGAAATATTC CTTGGATCAA TTACTGCGAG
CACTCACGTC TATGCGTTGA TCCTTCGCAG CGGTGACTTC ACTCGTGGAA ATGGTAAATA
AAATTTCTTC GGAGGATGAC TGTCAATTAT TTGATAGAAG TAGGTAGACC ACAGGTCTAT
CTACTAGCCT CGCTGACTTC GTCTTTCTAA ATTTTAGGCA CCGGCGGGGA GTCGATTTAC
GGTTCCAAGT TTGCGGATGA GAACTTTACT CTTAAACACA CTGGGGCAGG TACTTTAAGT
ATGGCAAATG GTATGGCAAT CAACAGTGAC GGACATTCAT GGCCTCCGTG AACAAACACG
CTGACCTCAT TTTGTGTATG TCTACAGCCG GACCGAACAC AAACGGTTCC CAGTTTTTTC
TTTGCACGGC CGAGACGCCT TGGTTGGACG GGAAACATGT TGTGTAAGTC TGTCTCACAA
AGGACAGTTT TGGCTTGCAT GTTTTATATA CTAGGTTCTC GGCTCACAAC TAACCAATGG
CGTCTTCGTA GATTCGGCAA GGTTGTGTCG GGACAAGATG TGGTCAGCGC CATTGAGCAA
GTAGGAAACG AATCAGGCAA AACTCGCGTT CCAGTCATTA TTGCGGATAG TGGACAGCTA
CGCTAA
 
Protein sequence
MSQNPVVFFD VTIGGSAKGR IEMELRADVV PKTAENFRCL CTGEKGIGKL GKPLHFKGSA 
FHRVIPNFMA QGGDFTRGNG TGGESIYGSK FADENFTLKH TGAGTLSMAN AGPNTNGSQF
FLCTAETPWL DGKHVVFGKV VSGQDVVSAI EQVGNESGKT RVPVIIADSG QLR