Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PHATRDRAFT_18274 |
Symbol | |
ID | 7197487 |
Type | CDS |
Is gene spliced | Yes |
Is pseudo gene | No |
Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
Kingdom | Eukaryota |
Replicon accession | NC_011670 |
Strand | - |
Start bp | 989242 |
End bp | 990327 |
Gene Length | 1086 bp |
Protein Length | 173 aa |
Translation table | |
GC content | 47% |
IMG OID | |
Product | predicted protein |
Protein accession | XP_002178047 |
Protein GI | 219112591 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGTCAGA ATCCGGTCGT GTTCTTTGAT GTTACCATAG GCGGATCGGC AAAGGTGTGT TTTCAGAGCC GTTTCCTTGG ATAGTAGTAA TGTCTGCCGA AAGCCATGGA GGAGGGCAGC TCGCCGGTCG GCACCATGTG ATGTCTCTTC TCTGACCGTG TACAAAAATA ACAACCAGGG TCGGATAGAA ATGGAGCTCA GAGCAGATGT TGTCCCCAAG ACGGCTGAAA ATTTTAGGTG CCTCTGTACG GGCGAGAAGG GTATCGGAAA ATTGGGGAAG CCTCTGCATT TTAAGGGATC AGCTTTTCAT CGTGTGGTAC GTACGAGCTA ATGCGGGAAT CTGTGTTCAC AAGAAATCCT ACCTTTTGGA CGAATTACGG CGTAGTCTTA CAGTCTCGTT CTTATTCACA AGATACCAAA CTTTATGGCC CAAGGGTACG TTCGGTAGAT AGAAATATTC CTTGGATCAA TTACTGCGAG CACTCACGTC TATGCGTTGA TCCTTCGCAG CGGTGACTTC ACTCGTGGAA ATGGTAAATA AAATTTCTTC GGAGGATGAC TGTCAATTAT TTGATAGAAG TAGGTAGACC ACAGGTCTAT CTACTAGCCT CGCTGACTTC GTCTTTCTAA ATTTTAGGCA CCGGCGGGGA GTCGATTTAC GGTTCCAAGT TTGCGGATGA GAACTTTACT CTTAAACACA CTGGGGCAGG TACTTTAAGT ATGGCAAATG GTATGGCAAT CAACAGTGAC GGACATTCAT GGCCTCCGTG AACAAACACG CTGACCTCAT TTTGTGTATG TCTACAGCCG GACCGAACAC AAACGGTTCC CAGTTTTTTC TTTGCACGGC CGAGACGCCT TGGTTGGACG GGAAACATGT TGTGTAAGTC TGTCTCACAA AGGACAGTTT TGGCTTGCAT GTTTTATATA CTAGGTTCTC GGCTCACAAC TAACCAATGG CGTCTTCGTA GATTCGGCAA GGTTGTGTCG GGACAAGATG TGGTCAGCGC CATTGAGCAA GTAGGAAACG AATCAGGCAA AACTCGCGTT CCAGTCATTA TTGCGGATAG TGGACAGCTA CGCTAA
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Protein sequence | MSQNPVVFFD VTIGGSAKGR IEMELRADVV PKTAENFRCL CTGEKGIGKL GKPLHFKGSA FHRVIPNFMA QGGDFTRGNG TGGESIYGSK FADENFTLKH TGAGTLSMAN AGPNTNGSQF FLCTAETPWL DGKHVVFGKV VSGQDVVSAI EQVGNESGKT RVPVIIADSG QLR
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