Gene PHATRDRAFT_16922 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPHATRDRAFT_16922 
Symbol 
ID7199137 
TypeCDS 
Is gene splicedYes 
Is pseudo geneNo 
Organism namePhaeodactylum tricornutum CCAP 1055/1 
KingdomEukaryota 
Replicon accessionNC_011697 
Strand
Start bp56898 
End bp57873 
Gene Length976 bp 
Protein Length235 aa 
Translation table 
GC content47% 
IMG OID 
Productpredicted protein 
Protein accessionXP_002185273 
Protein GI219130231 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
CCTCATTGGG ACTTGGGCGG ATGCTGCGAG ATCGAAGAGA TCATCTTCAT CTGCTTCTAC 
GCAGCCTATG TCGTTGCGTT CTTCGTTCTA TACCACACAA CCATTCTCAA GCCAATGCGA
CTATTGTCTG TTTTTGTCCA CGAATTTGGT CATGCCAGCG CATGCTTTAT GACGGGGGGT
TCCGTCAAGA AGATCGAGGT CTACGAAAAC GAAGGAGGTG TCACCGGGTA CACGGGAGGT
TGTCGGACAT TGGTTATCCC AGCTGGATAC GTTGGCGGTG CTTTCTGGGG AGGTGCGTTG
ACTGTAAATA GCGCATATGT TCGCGCTACC TCGCACCACA GAGGCCGACA TCTCACCTTT
CCTTTGCCCT TCCAGGTGTC TTTGTGGCTC TAAGTGGCAG CAAAATTGGC TCGACCATTG
TGGCATCACT TATTTCTTTT GCTCTATTGA TTTCACTTTG GTAAGTCGTC CTTTGCGTCA
TGTGTCCGAA ACAGAATGGT CCTTTTTTGG CGCTAATGAA GAAATCTTTT GTGCCACAGC
TTGAAGCCGA ATACAATGGT TGTAGCTCTC TCGTTGGGCT TTTCGAGTCT TCTAATTGGG
TTCATTTTCA TTGAGTGGTT TGTTTTCGAT CCCCTTCTCG AATTTATTAC TCTGTTTTTT
GGTGTTTTCA TTGGCATGTA CAGCGTGCGA GACATCTACG ACGGTAAGTA TAAAGCTGAC
CACACAATTT ATATCGTTTA TAGTTACGAA GACGTTTACT TACTGACTGT GAATGACGTT
TCGCCCCTTA TCTGAATACA ATACTACAGA CTTGATCACG CGAACAGCAG AAGGAAGTGA
TGCTGTGGCC TGTAATAAGC TTTACCCGTG TTGCCTGCCC CGATGTGTTG GAGTTCAGTT
TTGGATGGTG GCTTTTGCCT TCCAGGTAGC CGGAATTTAC TGTGCCCTAG TTTGGATGGT
AACAGAGCAC AATTAG
 
Protein sequence
PHWDLGGCCE IEEIIFICFY AAYVVAFFVL YHTTILKPMR LLSVFVHEFG HASACFMTGG 
SVKKIEVYEN EGGVTGYTGG CRTLVIPAGY VGGAFWGGVF VALSGSKIGS TIVASLISFA
LLISLCLKPN TMVVALSLGF SSLLIGFIFI EWFVFDPLLE FITLFFGVFI GMYSVRDIYD
DLITRTAEGS DAVACNKLYP CCLPRCVGVQ FWMVAFAFQV AGIYCALVWM VTEHN