Gene PHATRDRAFT_15937 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPHATRDRAFT_15937 
Symbol 
ID7195824 
TypeCDS 
Is gene splicedYes 
Is pseudo geneNo 
Organism namePhaeodactylum tricornutum CCAP 1055/1 
KingdomEukaryota 
Replicon accessionNC_011690 
Strand+ 
Start bp346706 
End bp347263 
Gene Length558 bp 
Protein Length154 aa 
Translation table 
GC content48% 
IMG OID 
Productpredicted protein 
Protein accessionXP_002184115 
Protein GI219127798 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value0.669488 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TACCGCAGGA TGAAAGCCGT ACCAATTGAA CAGCGGCTCG TCGCGCGAAG ATCGCATATT 
CATGGATGGG GCTTGTTTAC CAAATCGGAT ATCCAGAAGG ACGACCCAAT CATCGAATAT 
ATGGGGGAAG TGATCCGACA GCCAATTGCG GATCAACGAG AACGCGCGTA CGAAATTTCC 
GGAGAAGGTA GCTGCTACAT GTTCCGTCTA GACATGCAGC GCATTGTGGA TGCGACGAAG 
ATTGGCTGCA TGGCACGCTT TATGAATCAT TGCTGTGGCC CAAACGCATA CGCGAAAATT 
ATTTCGGTTG ACGCCGAGTT GGGTCAGGAC CGCAAGATTG TGGTGTTTGC AAATCGCGAC 
ATATCCGCTG GGGAAGAGAT AACGTATGGT ACGTTTGAAA TTTGGGAAGA TGACGAGGGA 
GAGATTGTTT CCATGGCACT CACTTGCATT AATCTTTCTC ATATTGGCAT TTGTTTTGCA 
GATTACAAGT TTCCGGTTGA AGATGGCAGT CTCCGGTGTA CTTGCGGGGC TCCCAATTGT 
ATTGGGCGAT TGAATTAA
 
Protein sequence
YRRMKAVPIE QRLVARRSHI HGWGLFTKSD IQKDDPIIEY MGEVIRQPIA DQRERAYEIS 
GEGSCYMFRL DMQRIVDATK IGCMARFMNH CCGPNAYAKI ISVDAELGQD RKIVVFANRD 
ISAGEEITYD YKFPVEDGSL RCTCGAPNCI GRLN