Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PHATRDRAFT_13150 |
Symbol | |
ID | 7201596 |
Type | CDS |
Is gene spliced | Yes |
Is pseudo gene | No |
Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
Kingdom | Eukaryota |
Replicon accession | NC_011678 |
Strand | - |
Start bp | 580242 |
End bp | 581965 |
Gene Length | 1724 bp |
Protein Length | 517 aa |
Translation table | |
GC content | 49% |
IMG OID | |
Product | predicted protein |
Protein accession | XP_002181031 |
Protein GI | 219120591 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.561954 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | CTCGTCAAGT ACGATCCGGT GGCCGCCGAG AAGCTGCTTT TTCGTCAGCC AGCCAAATGG GTTGTCCGAA ATTTTCAGAT CGCTTTTCCA ATCGGCTGGT GGGCCGCCTC GGTAGTGTGG GACTACGCCA CGGGCCGATC CCAACCGATG CGCCGGGCCC GTGCGCAACA GTTAACCCAG GCCGTTTCTG ATTTGGGACC GGCCATTATT AAAGGTGGAC AAGCACTGGC CTCACGTCCG GATTTGCTGC CCAGTGAATA CTTGGAAGAA TTGCAAAAAC TACAGGACGA TGTCCCGCGA TTCTCTAACC AGTTTGCGCT CCAGACCGTA CGAGAAGAGC TGGGACGGGA CTTTTCGGAA ATCTTTGAAC TCGTGGAGCA GGAGCCAATT GCGGCGGCAA GCATAGGGCA AGTGTACAAA GCACGACTCA AGGCAAATGG AGAAGAGGTC GCTATCAAGA TTCAACGCCC GGGATGCGAA GAGATTATTG CCTTGGATCT TTACGTACTG CGCTGGTGGT CCGGTATCTA CAATGGTATC TTCCGCTTGC TAAACCGTGA TATTGATGTA CAATCAATCA TTGATGACTT TGGCGAACTG ATTTACCGAG AAATCGACTA TGTGGCGGAA GCCGCCAACG CCCAGCGGTT TAACGAACTG TACGCGGGCG TCAAGGACGT GTTTGTGCCT AAAATCTACA GCGACTTGAC CACATCTAAA GTCTTGACCA TGGAATGGGT TGACGGCTTT CGTTTAACGG ATCGGGCATC TTTGACGAGA TACAATTTAG ACGAATCAAA GCTGGTTGAT ACCCTGGTAC AGTGCAGTTT GCGACAAATC CTTGGTAAGT GAAATAGGAG AGGGAATCTA CTGCGCAACG GAAGCCTTTG TGAGGGAGAC TTATATCTTT TCGTTCATTG TGAGATGACA GAGAATGGCT TTTTCCATGC AGATCCCCAC GCTGGTAAGT ATTCTGTTAC GCTGAATTGC TTGCTTTTGT TACGGCAGAT TTTTGCTCAC ACCTAGCAAC AAAATGTTCG TCATGTTCAG GAAACCTTTT GGCCTGCCCG GACGGCCGTT TGTGTTATTT AGACTTTGGC ATGATGAGTT ACGCTACGAA GAATCAACGC AATGGATTCC TGCTGGCAGT TGTTCACATT GTTAACCGTG ACTGGGAAAA GCTCGTTCGC CTTTACGTCA AGCTGGGCTT CATTCCAGAA GGCACAGATC TTAAGCCCAT CGAACTTGCG TTGGAAAACG CGTTACCAGA TGTATTGGAC GCCGACATCA GCGAGCTCAA TTTTAAGAAC GTCATTAATA AGCTTGGAGA CATCATGTAT CGATACCCCT TTTCACTGCC CCCATTCTAT ATCGCCATTA TTCGGTGTCT CGGCGTCCTG GAAGGCTTGG CCATTCAAGT GGACCCTAAG GCACGCATTA TTGGCGAAGC GTATCCGTAC GTGGCGAGTC GCGTTTTGAC CGATCCACAA GACGATCTAC AGGAAGCACT GAAAGGACTA GCGTTGACGA AAGATGGCCA TGTTCGATGG GATCGATTGG AGGGGTTGCT TGATGAAGCG AAGGAGTCAT CAGGGTACGA CGTCACGCTC GCTTTGGATG TGTTGACGGA TTATTTGATT TCGGAAGATG GCGACAATAT GCTGGTTGAG CTTTCCGAGC AGATCGTAAA TTCTGCTGAT AGTCTCGGTG CAGAAAGTAT AAGA
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Protein sequence | LVKYDPVAAE KLLFRQPAKW VVRNFQIAFP IGWWAASVVW DYATGRSQPM RRARAQQLTQ AVSDLGPAII KGGQALASRP DLLPSEYLEE LQKLQDDVPR FSNQFALQTV REELGRDFSE IFELVEQEPI AAASIGQVYK ARLKANGEEV AIKIQRPGCE EIIALDLYVL RWWSGIYNGI FRLLNRDIDV QSIIDDFGEL IYREIDYVAE AANAQRFNEL YAGVKDVFVP KIYSDLTTSK VLTMEWVDGF RLTDRASLTR YNLDESKLVD TLVQCSLRQI LENGFFHADP HAGNLLACPD GRLCYLDFGM MSYATKNQRN GFLLAVVHIV NRDWEKLVRL YVKLGFIPEG TDLKPIELAL ENALPDVLDA DISELNFKNV INKLGDIMYR YPFSLPPFYI AIIRCLGVLE GLAIQVDPKA RIIGEAYPYV ASRVLTDPQD DLQEALKGLA LTKDGHVRWD RLEGLLDEAK ESSGYDVTLA LDVLTDYLIS EDGDNMLVEL SEQIVNSADS LGAESIR
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