Gene PHATRDRAFT_12452 details

Gene Information

• Locus tag: PHATRDRAFT_12452
• Symbol: ATPase-3A
• ID: 7201040
• Type: CDS
• Is gene spliced: Yes
• Is pseudo gene: No
• Organism name: Phaeodactylum tricornutum CCAP 1055/1
• Kingdom: Eukaryota
• Replicon accession: NC_011676
• Strand: -
• Start bp: 824818
• End bp: 827528
• Gene Length: 2711 bp
• Protein Length: 809 aa
• GC content: 47%
• Product: P3A, P type ATPase
• Protein accession: XP_002180325
• Protein GI: 219119117

Plasmid Coverage information

• Num covering plasmid clones: 15
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

GAAGGTCTGA CGGCGGAAGA AGCTGCCAAG CGGCTCGAAC TGTACGGTCG AAATGAGCTT 
CCCGAGCATG TGGATCCCAA GTGGCTTATC TTCTTGCGCC AGTTCTGGGC CCCCATGCCT 
ATTATGATTT GGATCGCAGT AATCATTGAA GCTGGCATTC AAAATTTTAT CGATATGGGG 
ATTCTCTTGC TCATTCAGTT TGCGAACGGT TCAATTAGTT TCTACGAAAC CACCAAGGCG 
GGCGACGCCG TCGCAGCCCT CAAATCATCT CTCAAGCCTT CGGCGACCTG CAAGCGAGAC 
GGTAAATGGC AAGTGATCGA TGGTACCTTA CTGGTTCCCG GTGATACCGT TCTTTTGGGT 
AGTGGTTCAG CGATTCCCGC CGATTGCCGA GTGAATCATT CCGAGATCGA TGTTGATCAG 
GCAGCTCTTA CAGGCGAATC GCTACCGGTG ACGTTCTACA AAGGAGATTC TTGTAAAATG 
GGATCTACTG TTGTCCGTGG GGAAGTCGAG GTAAGTTTCT TTGTAAACGA AAGCACGTTT 
TCACCTCACG AACTAGTCAG AGCTCATTAC TCTTGCTATC TCTTTTTTTA CAGGCAACGG 
TTGAGTTTAC TGGAGCCGAG ACGTTTTTCG GCAAAACCGC CAGCTTGCTC CAAGAGCATC 
ACGAGTATAG TCACTTGCAG AAAATTCTCA TGAAAATCAT GATGGTATTG GTTGGTCTGT 
CCCTGACTTT GTGTATAATC AACTTTGCCT ATCTACTGGC GGAAGGCGTT GACGTGCAAG 
AAGCACTGTC TTTCACGATT GTGATTTTGG TCGCAAGTAT TCCTCTTGCC ATCGAAATCG 
TCACCACTAC GACCTTGGCA ATCGGGTCCA AGAATCTTGC CAAGCATGGT GCGATCGTCG 
CAAAACTTTC TGCAATCGAG GATCTCGCTG GCATGTCCAT TCTATGCTCT GACAAGACCG 
GCACTTTGAC GCTGAACCAA ATGATGCTTC AAGACGATAC CCCCATTTAC TGTGACGGAG 
AAACACAAGA GTCTGTACTA GTCTTGGCTG CTATGGCCGC CAAATGGAAA GAACCGCCGA 
GAGATGCGCT CGATCGCTTG ACTCTGGGCT CTGTAAACAT GTCACTTCTA GAATCCTACG 
AACAAACGGA TTATCTTCCA TTCGACCCAC AAACCAAAAG AACGGAAGGG ACGGTGCGAA 
ATAAGGAAAC AGGAGTTGAG TTCAAGACTT CGAAAGGAGC GCCACATATC ATCCTGGCTC 
TCCTCCCGCA GTCGTCGTCG AACATTCGAG ATCAAGTAGA AAAAGATGTT GCTCGTCTAG 
GAGAATGTGG TATTCGGTCC TTAGCAGTTG CCCGTACAAT CTCTGGAACT GACACGTGGG 
AAATGGCTGG TCTCCTGACG TTCCTGGATC CTCCTCGCCT CGATACAAAG CAAACAATCG 
AGGACGCTCG TCACCATGGA GTTCAGGTGA AAATGATCAC AGGTAAATTA CCTTTACCTG 
GTCGATACAA CAAGTGACTC ATAGTTCATT CCGGTACTCA CCTATTTCTG TACAAAAAAT 
CAGGTGACCA TTTGCTAATT GCACGGAATA CAGCCTTGCA ATTGGACATG GGAAACAAAA 
TATTTACTGC TGAAAGACTA CCTATGCTTG ATACCGAGAC TAAGACAAAG CCGAAAAACT 
TGAGCGCAGA TTATGGAGAT TTATGTCTCG TAGCCGATGG TTTTGCTCAA GTCTTCCCTG 
AGCATAAGTA TTTGATAGTT GAATGCCTTC GTGAAATGGG CTACGTACGT CATTTGCACT 
TGCTGGTACT GTCTCCATAT CTTTCACTGT CCTCACAACA CCGGTTTCTT CTTTAGACCG 
TGGGAATGAC GGGTGATGGG GTCAACGACG CTCCTGCTTT GAAAAGAGCT GATATTGGCA 
TAGCCGTTGC AGGTGCAACC GACGCAGCTA GAGCGGCCGC TGATATCGTT CTTACTGAGG 
AGGGACTAGG AACGATTATA CACGGAATCA TTCTGGCTCG CGAAATCTTT CAGAGAATGA 
GCAACTTTAT TACCTATCGA ATTTCGGCAA CTCTTCAGCT GCTGCTCTTT TTCTTTATAG 
CAATTTTCGC TTTTCATCCT AGTGACTACG ACGAACCCGA TGATCCCGAT CGTGGCTTGG 
CATGGCCAGA ATTCTTTCAT ATGCCGGTCC TCATGCTGAT GCTTATCACA TTGCTGAACG 
ATGGAACTCT GATCACAATT GCTTATGATT ATGCTGAAGC GAGCTCGACC CCTAACCGAT 
GGAATTTACC CGTACTTTTT GTTGCTAGTT CAGTGCTTGC TGCCGTGTCC TGCCTCAGTT 
CACTGCTCCT TCTTCACTTT CTCCTCGACA GTTGGAATCC GGATGGTTTG CTTCAGTCCC 
TTGGAATGGC AGGGGTTCAG TATGGTCAAA TAACCACATC TATTTATTTG AAGGTTTCTG 
TTTCGGATTT CCTCACGCTT TTCAGCGCTC GGACCGGTCA ACTTTTCTTT TGGCAGGTCA 
AGCCTGCTCC CATCTTAATG GCAGGTGGCC TTGTGGCGCT ATCGATATCA TCACTGCTTT 
CAATTTTCTG GCCCGATTCG GAGCCTGATG GCATTCTCTC TCAAGGATTG CAAGGCCAGA 
TTGGCCTATT CGCCTTTGTG TGGATATATT GCGTAATCTT TTGGTTCATT CAAGACTTCC 
TCAAAGTGGC T 

 

Protein sequence

EGLTAEEAAK RLELYGRNEL PEHVDPKWLI FLRQFWAPMP IMIWIAVIIE AGIQNFIDMG 
ILLLIQFANG SISFYETTKA GDAVAALKSS LKPSATCKRD GKWQVIDGTL LVPGDTVLLG 
SGSAIPADCR VNHSEIDVDQ AALTGESLPV TFYKGDSCKM GSTVVRGEVE ATVEFTGAET 
FFGKTASLLQ EHHEYSHLQK ILMKIMMVLV GLSLTLCIIN FAYLLAEGVD VQEALSFTIV 
ILVASIPLAI EIVTTTTLAI GSKNLAKHGA IVAKLSAIED LAGMSILCSD KTGTLTLNQM 
MLQDDTPIYC DGETQESVLV LAAMAAKWKE PPRDALDRLT LGSVNMSLLE SYEQTDYLPF 
DPQTKRTEGT VRNKETGVEF KTSKGAPHII LALLPQSSSN IRDQVEKDVA RLGECGIRSL 
AVARTISGTD TWEMAGLLTF LDPPRLDTKQ TIEDARHHGV QVKMITGDHL LIARNTALQL 
DMGNKIFTAE RLPMLDTETK TKPKNLSADY GDLCLVADGF AQVFPEHKYL IVECLREMGY 
TVGMTGDGVN DAPALKRADI GIAVAGATDA ARAAADIVLT EEGLGTIIHG IILAREIFQR 
MSNFITYRIS ATLQLLLFFF IAIFAFHPKF FHMPVLMLML ITLLNDGTLI TIAYDYAEAS 
STPNRWNLPV LFVASSVLAA VSCLSSLLLL HFLLDSWNPD GLLQSLGMAG VQYGQITTSI 
YLKVSVSDFL TLFSARTGQL FFWQVKPAPI LMAGGLVALS ISSLLSIFWP DSEPDGILSQ 
GLQGQIGLFA FVWIYCVIFW FIQDFLKVA