Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PHATRDRAFT_11703 |
Symbol | |
ID | 7200019 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
Kingdom | Eukaryota |
Replicon accession | NC_011674 |
Strand | - |
Start bp | 823585 |
End bp | 826044 |
Gene Length | 2460 bp |
Protein Length | 820 aa |
Translation table | |
GC content | 52% |
IMG OID | |
Product | predicted protein |
Protein accession | XP_002179515 |
Protein GI | 219117441 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GACGCGGATG CGATCACAGC TTACGCTCTG GCGCACAACG ATCAGACCAT CGTGACCTGC TCGCACAGTA GTCTGCTCAG GCAGTATGCG CTCCTCCCGA CCAGAACAAC TCCACAACAC GCCAAACCGG CACAACTGAT CAAAACATGG GGTAAATCCG GACACACCTT GCCCGTTACG GAACTTGCAT TTCATCGCTC TAACGTATTC TGTGCTACCG GATCGGTCGA CGGCAGTGCC CGCGTTTGGG ATGTGCGCGG AGGATTTTGC ACTCACGTCT TCCGACCAAT GGCCGCACGC GAAGGCGCGG CGGGTGGGGG AGGAAGCGGA ACATTGTCCG TCACATGTCT GTCCTGGCTG CCGGACGTAA CGCATTTAGT ACTCGCAGTT GGACGGGACG ACGGGAGTAT TTCTCTATAC GATTTGCGCG ACACGGAACA ACAGCAGGTT GTGGTGTTGC GTGATCATCT GTCGTCCGTC ACCAGTGTTG AATGGAACGC AAAGTTGGAC ATTTTAGTAA CGACTGGACG CGACGCCGTC GTCAATCTGT GGCGCATCGG CGAGAGCCCC AAGGTGGACA CGAAGAAGAA GTCCAAGAAG TGGCAAAATG CTGGAACCGT CTCCCTAACT TATCGACGGA TTCACACCCT GCCCGTTTAC GAACAAGTCG AAGGGATGGT TGTACTTCCA CCAACGGAAA GCCGACGAGA TCTAGTCTTG GCGACGGCTG GAAGTAAAGG TCAGATTCGC CTCTGGCAAG CCAAAGAGGA CGAAGAATCC GGCAAAATGG CACTCGTCTT GCTAGCGGAG CAGCCTGTAT CCGAGTCGTT TGGGGAAGCC CGTGGTGGGT ACATGAATTT GCAATACATT CCATTGGCCA AACCAATGGG CAAAACGAAA CCGAGCCAAG GCCATGAGTT TGTTCAGGAG CAACTCGTCG TGGCTGACGC CGAAAACAAT ATCTCTTTCC TGTCACTGTC CGAAGCTTAC CTTTTGCAAA CTGATCGCAC GATTGTTGGA CATAACGACG ATATTCTCGA CCTCAAGGCA ATTCCACCCC CTGTCGGCCA CGACGTAGTT CACGTCGTAG TCGCAACCAA TAGTGCCCAA GTTCGACTCT TTGATCTCCG AAATTTTTCA TGCCAAGTGC TGGATCGCCA TACGGCCACC GTACTTTGCG TCGACGTAAG TCCGTGCGGA CGATACGTCG CAACTTGCGG CAAGGACAAG ACGATGCGGT TATGGTCACT GGCATCGCAA AGTAGTGTGG CCGTGGCAAC AGGTCATACC GAAGCCATTG GGTCGACCGC ATTATCTCGC AAGCAAGGTC GATACGACGT CCGGGGCAAG GCGGCCACGA ACGGTGGTGG TTCGTTCGTA GTGACGGTCA GCATGGACCG TACACTGAAA CGATGGAATC TACCCGGTGT GGCAGACTTG GAAAGACTTG GCGAGGATAG AGAAGAGACT CCACTTAAGG CTTTCGTGAG TGTTCGAGCT CACGAAAAAG ATATCAATAT TGTATCTGTG GCTCCCAATG ATTCGCTCGT TGCAACGGGA TCGCAGGATA AGACTGTCAA ACTCTGGAAA TCCAATGATT TATCACTACA AGCAACGTTG AAAGGACATC GGCGAGGTGT TTGGGACTGC CAGTTCTCTC CTCATGACAG AATATTAGCT ACGGGAAGCG GTGATCGCTC AATCAAGGTC TGGTCCTTAA GTGATTACAG CTGTGTTCGA ACTTTCCAAG GCCACTTGGC GAGTGTGTTA AGAGTCAGAT TTTTGAACGG AGGCCTTCAA ATGGTGTCAT CCGGTGCTGA TGGGCTCGTG AAACTCTGGA CAATTCGAAC GAACGAGTGT GAAGCGACGA TGGATGGGCA CAATGACAAG GTCTGGGCGC TCGATTTGGC GGCGAATGGA ACGAAAATGA TTTCGGGTGG TGCGGATTCT AGGATTGTCG TGTGGGAAGA TACAACTAAG GCTGACGAAG ACGCTAGACA AGCTGAGGAG GAAGAAGCTA TTGTCTTAGA CCAATCGCTC GCAAATCATA TAAGGCACAA GGAATACACC CAGGCGCTCG AAATTGCTCT ACAGAGAGAC AAACCTCACC AAGCTCTAAA AATTCTGGCA TCTATCGTTG AAAGCGAGGC GCAAAAGGGG AGACCAGGCT TTGAGTCTCT CCAACGGCAT GTAAAGGGAT GGGCGACGGA GCGTCTTGTT CAAGTCCTTC GATATTGTCG TGAGTGGAAT ACTCGTGCAC GAAACTCCCA CATTGCATTG CTAGTCGTCC GTGCCATAGT TTCCTCGATT CCTGCTCACA AGTTAGCGGC AACTGACGGC GTGCCAGAAA TTTTGGCGGG TATTGTTCCG TACGCTGAGC GTCATTTTGA TCGTTTAGAC AAACTTTATG CTGGCTCGTA CCTACTCGAT TTTGCCCTCT TCGCCATGGG AAGACTTGAT
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Protein sequence | DADAITAYAL AHNDQTIVTC SHSSLLRQYA LLPTRTTPQH AKPAQLIKTW GKSGHTLPVT ELAFHRSNVF CATGSVDGSA RVWDVRGGFC THVFRPMAAR EGAAGGGGSG TLSVTCLSWL PDVTHLVLAV GRDDGSISLY DLRDTEQQQV VVLRDHLSSV TSVEWNAKLD ILVTTGRDAV VNLWRIGESP KVDTKKKSKK WQNAGTVSLT YRRIHTLPVY EQVEGMVVLP PTESRRDLVL ATAGSKGQIR LWQAKEDEES GKMALVLLAE QPVSESFGEA RGGYMNLQYI PLAKPMGKTK PSQGHEFVQE QLVVADAENN ISFLSLSEAY LLQTDRTIVG HNDDILDLKA IPPPVGHDVV HVVVATNSAQ VRLFDLRNFS CQVLDRHTAT VLCVDVSPCG RYVATCGKDK TMRLWSLASQ SSVAVATGHT EAIGSTALSR KQGRYDVRGK AATNGGGSFV VTVSMDRTLK RWNLPGVADL ERLGEDREET PLKAFVSVRA HEKDINIVSV APNDSLVATG SQDKTVKLWK SNDLSLQATL KGHRRGVWDC QFSPHDRILA TGSGDRSIKV WSLSDYSCVR TFQGHLASVL RVRFLNGGLQ MVSSGADGLV KLWTIRTNEC EATMDGHNDK VWALDLAANG TKMISGGADS RIVVWEDTTK ADEDARQAEE EEAIVLDQSL ANHIRHKEYT QALEIALQRD KPHQALKILA SIVESEAQKG RPGFESLQRH VKGWATERLV QVLRYCREWN TRARNSHIAL LVVRAIVSSI PAHKLAATDG VPEILAGIVP YAERHFDRLD KLYAGSYLLD FALFAMGRLD
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