Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PHATRDRAFT_10852 |
Symbol | |
ID | 7197926 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
Kingdom | Eukaryota |
Replicon accession | NC_011672 |
Strand | + |
Start bp | 1309035 |
End bp | 1309535 |
Gene Length | 501 bp |
Protein Length | 167 aa |
Translation table | |
GC content | 52% |
IMG OID | |
Product | predicted protein |
Protein accession | XP_002178403 |
Protein GI | 219115215 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 33 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGCCCTACG TAATCCCTGG ACCGTATCCT ACCCTACCGA ATTTGTCTTG GCTTGAACTG GTATGCCAAA TTTTGGCAAT CTTGATTGCA AACGATTTTT TGCTCTACTG GGGCCATCGT ATTCAGCACG AGAGCGACTA TCTGTGGCAA TTCCACGCCG AGCATCATCG CATAAGTACA CCTCGTCCGC TCACGACGGC CAACATTCAC CCTATTGACG GGACGCTCCA AGGGGGGCTG CCACTGATTC TAGCATGTGC GTGGTTCAAG CCACATCCCT TGATCTTTTA CGGTTTGATT GTGGTGCGGT ACGGCGAAAA TGTTCTCAAT CACAGCGGAC TCGATACGTG GTGGACACGA GCCCTCAAGG GCTCTTGGTT CGTGCCGTTC GTCCGAGCTG GCGTAAACCA CCACGACCGC CATCACAAAA TGTCCAACCA CGCCAAGGGA GCAACTAACT ATGGAGAGTC TCTTGTAATC TGGGACTGGC TCTTTGGGAC A
|
Protein sequence | MPYVIPGPYP TLPNLSWLEL VCQILAILIA NDFLLYWGHR IQHESDYLWQ FHAEHHRIST PRPLTTANIH PIDGTLQGGL PLILACAWFK PHPLIFYGLI VVRYGENVLN HSGLDTWWTR ALKGSWFVPF VRAGVNHHDR HHKMSNHAKG ATNYGESLVI WDWLFGT
|
| |