| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PG1981 |
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| Symbol | cas2-1 |
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| ID | 2553196 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Porphyromonas gingivalis W83 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_002950 |
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| Strand | - |
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| Start bp | 2069305 |
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| End bp | 2069595 |
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| Gene Length | 291 bp |
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| Protein Length | 96 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 637150565 |
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| Product | CRISPR-associated Cas2 family protein |
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| Protein accession | NP_906055 |
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| Protein GI | 34541576 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG1343] Uncharacterized protein predicted to be involved in DNA repair |
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| TIGRFAM ID | [TIGR01573] CRISPR-associated endoribonuclease Cas2 |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 0.517558 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAATGACA AAAAACTGCT GGTTGCGTAC GACATATCCT CCAACAGGCG AAGACGTAAG
GTTGCACGGA TATTGGAGCA GTGTGGTATA CGCATCAATA AGTCGGTATT CATCTGCAGC
CTGCGAGAGC TGACAATGGA CAAGTTGGTA GAGGCTGTTA CCTCACAGAC AGCTAAGAGA
GACAAGGTGT TTTTTCTTCC TCTCTGTCAG CATTGTTACA CCGCTGCTTG GATGAGCGGA
CATCCGACCC TCCCTAAGAG CCGGAGAAAA AGGAAAAGTA TTGTGGTTTA G
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| Protein sequence | MNDKKLLVAY DISSNRRRRK VARILEQCGI RINKSVFICS LRELTMDKLV EAVTSQTAKR
DKVFFLPLCQ HCYTAAWMSG HPTLPKSRRK RKSIVV
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