| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PG1943 |
|---|
| Symbol | |
|---|
| ID | 2552167 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Porphyromonas gingivalis W83 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_002950 |
|---|
| Strand | - |
|---|
| Start bp | 2029064 |
|---|
| End bp | 2030350 |
|---|
| Gene Length | 1287 bp |
|---|
| Protein Length | 428 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 51% |
|---|
| IMG OID | 637150535 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | NP_906025 |
|---|
| Protein GI | 34541546 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | n/a |
|---|
| Plasmid unclonability p-value | n/a |
|---|
| Plasmid hitchhiking | n/a |
|---|
| Plasmid clonability | n/a |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 28 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCAAACGA GTAGCAAAAC GAAGAAAAAA ATGGAAGGTT CGCGCGATAG TACTTCGAAG
AAACAGAAAA ACGGGGAGCA TGGGCATTCG GAGAGAAAAA TGGCCAACTC ATTGCAGATC
CTCATGCTTG CATCGCTCCT ATGGTTGGCA ATAGAAGATT TGGCCACTTC GGGACAATGG
GGAATATCTG CCATTACCGG GCTGGCTTTT TGGGCAATCC TACGGAAGCG CAGACTACTG
CCAAGAAAGA TCGATCAGCG GTTGCAATCA CTTCTCTTTC CCCTTCGGGT ACGAATCCGC
GCATTCGAGT TGAGACTGAT GCGTGGCAGA GCGACTCCAC CTGCAGACCC ATACATACAT
ATATGCCAAA ACTGCGGAGA TGGATATACG GGCAATTTCT GCAACCGCTG CGGACAAACC
TCTCGCACCG GACGGTATCA CTTCCGGCAG ATGATCCGAA ATGTGATAGG CGGCTTCACC
AATATCGACA GCGGTTTCGG GCGTACTATC GTGGAGCTGC TCTACCGCCC GGGTTATTTG
ATACGGGACT TTATCGGTGG CAAGAGGGTT GTCTACTTCC GTCCCTTTCA GGCCCTTTTC
GTGCTGGCCT CTCTGTACAT CATCTTTGCA CAACTGATCG GACCTGATCC CTTGCAGAAA
AAGCCCATTG GCGAAGAGCT TACGCGTCAA GAGTATCGGA TGGATCAAAA AGAAATATCC
TCCTTGCAAA AGGAGAATAA GGCAGTCGGC AGCGATAGCG GAGAAATGAT TGCCGAGCGA
CACACGGGGA GAAGAGCCTT TTTTTACAAA CAAATGAGGT TTGTCACCGA GCAGAAAAAT
AGGTTGAAGT CCCTCCCTTT CTTTTCAAGA ATATGGAGCC TGCTGATGGA GTGGTTTCAA
GGCAACAAGG CTGTCAGGAT CATCAGTATT CTTCCCATTC TCGCCGTGAG TACGAAAGCG
GCTTTCCGAC AAAAAGGAGC CGGAGCATAT AATCTGACGG AGCACATTAT CGCTCAGGCG
TACATAGCCT GCCAGCTATT GTTGCTGAAC GTTCTCGCCC TACCTTTCTA CAGCGATGCC
CGGGTGGGGT CGCTATACGG GCTACCTGCA TTGCTCCTAT TCCTTTTGTT TTGCTGGGAC
TACAAGCAGC TATTCCTCTG CTCTTGGTGG CGGAGCTTCT GGCGGACAAT CCTCGTTGTG
GTCTATTGCT TGCTCTTCTT GGCTCTGACG GCTTCGCTGA TTGCGGTAGT TATTGTGGCG
ATCGAGGCTG TCGGTACAGC TTCATAG
|
|---|
| Protein sequence | MQTSSKTKKK MEGSRDSTSK KQKNGEHGHS ERKMANSLQI LMLASLLWLA IEDLATSGQW
GISAITGLAF WAILRKRRLL PRKIDQRLQS LLFPLRVRIR AFELRLMRGR ATPPADPYIH
ICQNCGDGYT GNFCNRCGQT SRTGRYHFRQ MIRNVIGGFT NIDSGFGRTI VELLYRPGYL
IRDFIGGKRV VYFRPFQALF VLASLYIIFA QLIGPDPLQK KPIGEELTRQ EYRMDQKEIS
SLQKENKAVG SDSGEMIAER HTGRRAFFYK QMRFVTEQKN RLKSLPFFSR IWSLLMEWFQ
GNKAVRIISI LPILAVSTKA AFRQKGAGAY NLTEHIIAQA YIACQLLLLN VLALPFYSDA
RVGSLYGLPA LLLFLLFCWD YKQLFLCSWW RSFWRTILVV VYCLLFLALT ASLIAVVIVA
IEAVGTAS
|
|---|
| |