| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PG1827 |
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| Symbol | |
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| ID | 2551964 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Porphyromonas gingivalis W83 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_002950 |
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| Strand | + |
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| Start bp | 1920154 |
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| End bp | 1920795 |
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| Gene Length | 642 bp |
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| Protein Length | 213 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 637150435 |
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| Product | ECF subfamily RNA polymerase sigma factor |
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| Protein accession | NP_905925 |
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| Protein GI | 34541446 |
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| COG category | [K] Transcription |
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| COG ID | [COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog |
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| TIGRFAM ID | [TIGR02937] RNA polymerase sigma factor, sigma-70 family |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 28 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGTCATTGA TGCCGTCTAT TATGCTTAAT ACGCTGTTTA TTAGGGTTTC TCACCTATTC
GATTATCTTT GTGTCTGTGG CAGGAGGGAA CGAATCTTCC AACCATTGGC TTCAACAACA
ACAAAGAAAC AGCTTATTAT GAATAGTGTG CAATTTCGCG AAAAACTTCT GAGTCTGCAA
GACAATATGC GCAATTTTGC CCTGACTCTG ACTGCCAATC GGGATGATGC AGAGGATTTG
CTCCAAGATA CAACTCTCCG TGTGCTTCAT AACGAGGACA AGTTCGTTGA TAATGTCAAC
TTCAAAGGCT GGGTGCTCAC TGTCATGCGA AATATCTTCA TCAACAACTA TCATAAGTTG
GTTCGCTCAC AAACGGTTAT CGATCCCAAC AGCGATCCGT ACAATGTACC TCTCCTGAAT
GAGGGAGGAG AGGATACGCC CGATGGCACT ATGACCATCA AAGAGATAAC GGCGGCCATT
GCATCGCTGA ATGAGACTCT CAAGCAGCCA TTCTCCATGT ACGTGAGCGG ATATAAATAC
AATGAAATAT CCGAGACTCT TGGAATCCCT CTCGGCACGG TGAAGAGCCG TATATTTCTT
GCCAGACAGG AACTCCAGCA GCAACTCAAG GACATGAGAT AA
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| Protein sequence | MSLMPSIMLN TLFIRVSHLF DYLCVCGRRE RIFQPLASTT TKKQLIMNSV QFREKLLSLQ
DNMRNFALTL TANRDDAEDL LQDTTLRVLH NEDKFVDNVN FKGWVLTVMR NIFINNYHKL
VRSQTVIDPN SDPYNVPLLN EGGEDTPDGT MTIKEITAAI ASLNETLKQP FSMYVSGYKY
NEISETLGIP LGTVKSRIFL ARQELQQQLK DMR
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