Gene PG1793 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPG1793 
SymbolglgB 
ID2552291 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePorphyromonas gingivalis W83 
KingdomBacteria 
Replicon accessionNC_002950 
Strand
Start bp1884062 
End bp1886068 
Gene Length2007 bp 
Protein Length668 aa 
Translation table11 
GC content51% 
IMG OID637150403 
Product1,4-alpha-glucan branching enzyme 
Protein accessionNP_905894 
Protein GI34541415 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0296] 1,4-alpha-glucan branching enzyme 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGAATAA TCGAACAAGA TCCTTGGCTG CGCCCATATG AATCAGTAAT AGAAAGCAGA 
CTGAAGTATG CTCGCAAACG AGAGACGGAT TTGACCGGAG GAAGATCCGG AGGATTGAGC
GACTTCGCCA ATGGACATCT CTATTACGGT CTTCATCAGG ACGGGGATTC GTGGGTGATT
CGTGAGTTCG CGCCCGAAGC CACGGCCGTA TATCTGATCG GCGAACTTTC GCGCTGGCGT
AGATTGCCAC AGTTTCGGTT TGCGCCTGTG GATGAAGCGG GTTCATGGGA ATTGCGACTT
TCATGCCGAC TGCTTCCGCA TGGCTCTCGC TACAGGCTCT TCTTCGAATG GCCCGGTGGC
GAAGGAGAGA GGATACCGGC TTGGTGCAAC CGTGTAGAAC AGGATCCTGA AACTTATCTT
TTCTACGCCC AAGTGTGGGT GCCGGATACT CCCTATGAAA TGAAACACCC TCATCCTAAC
CGTAAGGACG AGCCTTTGCT AATTTATGAA TGTCATATCG GGATGTCGTC CGAGGAGGAG
AAGGTCAGCA CATACGAAGA GTTTCGACGG AATATCCTCC CCCGTATCTG CAAGGACGGC
TATAATGCCA TACAGCTCAT GGCGATACAG GAGCATCCTT ATTACGCGTC GTTCGGCTAT
CATGTGTCGA GTTTCTTTGC TCCGAGCAGT CGTTTTGGAA CGCCCGAAGA TCTCAAGCGT
CTGATTGATG AAGCCCACGC TCTCGGCCTC TACGTGATCA TGGATCTGGT GCATTCGCAT
GCAGTCAAGA ACGAGGTCGA AGGCTTGGGC TTGTATGACG GCACGCATAC CCTTTTCTTC
CATGACGGCA ATCGCGGACT CCATCCGGCT TGGGATTCGT ATTGCTTCGA CTATGGTAGG
GACAACGTAC TGCACTTCCT CCTTTCCAAC TGCAAATACT GGCTGACAGA GTTTGGATTC
GACGGCTTCC GTTTCGATGG TGTGACGTCC ATGCTATACT ATAGTCATGG ACTCGGCGAT
AGGTTCGACA ATTACGACAG CTATTACAAC GGCCATCAGG ACGGCGATGC TATTGCCTAT
CTGATCTTGG CCAACAAACT CATTCACGAA CTTTGCCCCG ATGCAATCAC GATAGCCGAA
GAGGTAAGCG GCATGCCCGG ATTAGCTCTT CCCTTGGCAG ATGGGGGATA TGGCTTTGAC
TACCGTTTAG CCATGAATAT CCCCGATTTC TGGATCAAGC TCATCAAAGA GCATCGTGAC
GAAGACTGGA ATCCCGGCGA CATCTGGTAT CAACTGACCA ATCGCCGTCA GGAGGAAAAG
ACGATCAGCT ATGCCGAGAG TCACGATCAG GCTTTGGTCG GGGACAAGAC AATCATATTT
CGCCTGATCG ATGCCGATAT GTATTGGTAT ATGAACAAGC AGAGTTGTGT ACATAGCGTG
GACAGAGGCA TTGCACTGCT GAAGATGATC CGTCTCTTCA CTGCCACGAC GATGAATGGT
GGTTATCTCA ATTTCATGGG CAATGAATTC GGACATCCCG AGTGGATAGA CTTCCCTCGC
GAAGGGAATG GCTGGTCGTA CAAGTATGCC CGCAGGCAGT GGAGTCTGGC CGATAGTCCT
TTCTTGCGCT ATGCAGGTCT GCACTTGTTT GATCAGGATA TGATAGCCAT GATACGATCG
GTGGAGAGCT TTCACAAACT CCCTTTGCGC GAATACTGGC TCAAGAGAGA AGAGCAGGTG
ATCTGTTACG GTCGAGGCGA TTTCTTCTTC GTTTTCAATT TTCACCCCGA ACGTTCTTAT
TCGGATTATC CCATCCCTCT TCCGGCCGGT AAGTATTCGG TAGCGATGAG TACCGATGCA
CGGAAGTACG AAGGTTTCGG TCGTGTGGAC GAATGGGTGG AGCACTTTAC TCTTCCGGAT
GGGAGTAAAG ATCGGTTTAC CCATGAACAG TATTTGAACC TCTATCTGCC GGCTCGCTCT
GCTCTCGTCC TGAAGCTTGC CGAATGA
 
Protein sequence
MRIIEQDPWL RPYESVIESR LKYARKRETD LTGGRSGGLS DFANGHLYYG LHQDGDSWVI 
REFAPEATAV YLIGELSRWR RLPQFRFAPV DEAGSWELRL SCRLLPHGSR YRLFFEWPGG
EGERIPAWCN RVEQDPETYL FYAQVWVPDT PYEMKHPHPN RKDEPLLIYE CHIGMSSEEE
KVSTYEEFRR NILPRICKDG YNAIQLMAIQ EHPYYASFGY HVSSFFAPSS RFGTPEDLKR
LIDEAHALGL YVIMDLVHSH AVKNEVEGLG LYDGTHTLFF HDGNRGLHPA WDSYCFDYGR
DNVLHFLLSN CKYWLTEFGF DGFRFDGVTS MLYYSHGLGD RFDNYDSYYN GHQDGDAIAY
LILANKLIHE LCPDAITIAE EVSGMPGLAL PLADGGYGFD YRLAMNIPDF WIKLIKEHRD
EDWNPGDIWY QLTNRRQEEK TISYAESHDQ ALVGDKTIIF RLIDADMYWY MNKQSCVHSV
DRGIALLKMI RLFTATTMNG GYLNFMGNEF GHPEWIDFPR EGNGWSYKYA RRQWSLADSP
FLRYAGLHLF DQDMIAMIRS VESFHKLPLR EYWLKREEQV ICYGRGDFFF VFNFHPERSY
SDYPIPLPAG KYSVAMSTDA RKYEGFGRVD EWVEHFTLPD GSKDRFTHEQ YLNLYLPARS
ALVLKLAE