Gene PG1793 details

Gene Information

• Locus tag: PG1793
• Symbol: glgB
• ID: 2552291
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Porphyromonas gingivalis W83
• Kingdom: Bacteria
• Replicon accession: NC_002950
• Strand: +
• Start bp: 1884062
• End bp: 1886068
• Gene Length: 2007 bp
• Protein Length: 668 aa
• Translation table: 11
• GC content: 51%
• IMG OID: 637150403
• Product: 1,4-alpha-glucan branching enzyme
• Protein accession: NP_905894
• Protein GI: 34541415
• COG category: [G] Carbohydrate transport and metabolism
• COG ID: [COG0296] 1,4-alpha-glucan branching enzyme

Plasmid Coverage information

• Num covering plasmid clones: n/a
• Plasmid unclonability p-value: n/a
• Plasmid hitchhiking: n/a
• Plasmid clonability: n/a

Fosmid Coverage information

• Num covering fosmid clones: 29
• Fosmid unclonability p-value: 1
• Fosmid Hitchhiker: No
• Fosmid clonability: normal

Sequence

Gene sequence

ATGAGAATAA TCGAACAAGA TCCTTGGCTG CGCCCATATG AATCAGTAAT AGAAAGCAGA 
CTGAAGTATG CTCGCAAACG AGAGACGGAT TTGACCGGAG GAAGATCCGG AGGATTGAGC 
GACTTCGCCA ATGGACATCT CTATTACGGT CTTCATCAGG ACGGGGATTC GTGGGTGATT 
CGTGAGTTCG CGCCCGAAGC CACGGCCGTA TATCTGATCG GCGAACTTTC GCGCTGGCGT 
AGATTGCCAC AGTTTCGGTT TGCGCCTGTG GATGAAGCGG GTTCATGGGA ATTGCGACTT 
TCATGCCGAC TGCTTCCGCA TGGCTCTCGC TACAGGCTCT TCTTCGAATG GCCCGGTGGC 
GAAGGAGAGA GGATACCGGC TTGGTGCAAC CGTGTAGAAC AGGATCCTGA AACTTATCTT 
TTCTACGCCC AAGTGTGGGT GCCGGATACT CCCTATGAAA TGAAACACCC TCATCCTAAC 
CGTAAGGACG AGCCTTTGCT AATTTATGAA TGTCATATCG GGATGTCGTC CGAGGAGGAG 
AAGGTCAGCA CATACGAAGA GTTTCGACGG AATATCCTCC CCCGTATCTG CAAGGACGGC 
TATAATGCCA TACAGCTCAT GGCGATACAG GAGCATCCTT ATTACGCGTC GTTCGGCTAT 
CATGTGTCGA GTTTCTTTGC TCCGAGCAGT CGTTTTGGAA CGCCCGAAGA TCTCAAGCGT 
CTGATTGATG AAGCCCACGC TCTCGGCCTC TACGTGATCA TGGATCTGGT GCATTCGCAT 
GCAGTCAAGA ACGAGGTCGA AGGCTTGGGC TTGTATGACG GCACGCATAC CCTTTTCTTC 
CATGACGGCA ATCGCGGACT CCATCCGGCT TGGGATTCGT ATTGCTTCGA CTATGGTAGG 
GACAACGTAC TGCACTTCCT CCTTTCCAAC TGCAAATACT GGCTGACAGA GTTTGGATTC 
GACGGCTTCC GTTTCGATGG TGTGACGTCC ATGCTATACT ATAGTCATGG ACTCGGCGAT 
AGGTTCGACA ATTACGACAG CTATTACAAC GGCCATCAGG ACGGCGATGC TATTGCCTAT 
CTGATCTTGG CCAACAAACT CATTCACGAA CTTTGCCCCG ATGCAATCAC GATAGCCGAA 
GAGGTAAGCG GCATGCCCGG ATTAGCTCTT CCCTTGGCAG ATGGGGGATA TGGCTTTGAC 
TACCGTTTAG CCATGAATAT CCCCGATTTC TGGATCAAGC TCATCAAAGA GCATCGTGAC 
GAAGACTGGA ATCCCGGCGA CATCTGGTAT CAACTGACCA ATCGCCGTCA GGAGGAAAAG 
ACGATCAGCT ATGCCGAGAG TCACGATCAG GCTTTGGTCG GGGACAAGAC AATCATATTT 
CGCCTGATCG ATGCCGATAT GTATTGGTAT ATGAACAAGC AGAGTTGTGT ACATAGCGTG 
GACAGAGGCA TTGCACTGCT GAAGATGATC CGTCTCTTCA CTGCCACGAC GATGAATGGT 
GGTTATCTCA ATTTCATGGG CAATGAATTC GGACATCCCG AGTGGATAGA CTTCCCTCGC 
GAAGGGAATG GCTGGTCGTA CAAGTATGCC CGCAGGCAGT GGAGTCTGGC CGATAGTCCT 
TTCTTGCGCT ATGCAGGTCT GCACTTGTTT GATCAGGATA TGATAGCCAT GATACGATCG 
GTGGAGAGCT TTCACAAACT CCCTTTGCGC GAATACTGGC TCAAGAGAGA AGAGCAGGTG 
ATCTGTTACG GTCGAGGCGA TTTCTTCTTC GTTTTCAATT TTCACCCCGA ACGTTCTTAT 
TCGGATTATC CCATCCCTCT TCCGGCCGGT AAGTATTCGG TAGCGATGAG TACCGATGCA 
CGGAAGTACG AAGGTTTCGG TCGTGTGGAC GAATGGGTGG AGCACTTTAC TCTTCCGGAT 
GGGAGTAAAG ATCGGTTTAC CCATGAACAG TATTTGAACC TCTATCTGCC GGCTCGCTCT 
GCTCTCGTCC TGAAGCTTGC CGAATGA 

 

Protein sequence

MRIIEQDPWL RPYESVIESR LKYARKRETD LTGGRSGGLS DFANGHLYYG LHQDGDSWVI 
REFAPEATAV YLIGELSRWR RLPQFRFAPV DEAGSWELRL SCRLLPHGSR YRLFFEWPGG 
EGERIPAWCN RVEQDPETYL FYAQVWVPDT PYEMKHPHPN RKDEPLLIYE CHIGMSSEEE 
KVSTYEEFRR NILPRICKDG YNAIQLMAIQ EHPYYASFGY HVSSFFAPSS RFGTPEDLKR 
LIDEAHALGL YVIMDLVHSH AVKNEVEGLG LYDGTHTLFF HDGNRGLHPA WDSYCFDYGR 
DNVLHFLLSN CKYWLTEFGF DGFRFDGVTS MLYYSHGLGD RFDNYDSYYN GHQDGDAIAY 
LILANKLIHE LCPDAITIAE EVSGMPGLAL PLADGGYGFD YRLAMNIPDF WIKLIKEHRD 
EDWNPGDIWY QLTNRRQEEK TISYAESHDQ ALVGDKTIIF RLIDADMYWY MNKQSCVHSV 
DRGIALLKMI RLFTATTMNG GYLNFMGNEF GHPEWIDFPR EGNGWSYKYA RRQWSLADSP 
FLRYAGLHLF DQDMIAMIRS VESFHKLPLR EYWLKREEQV ICYGRGDFFF VFNFHPERSY 
SDYPIPLPAG KYSVAMSTDA RKYEGFGRVD EWVEHFTLPD GSKDRFTHEQ YLNLYLPARS 
ALVLKLAE