| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PG1616 |
|---|
| Symbol | |
|---|
| ID | 2552820 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Porphyromonas gingivalis W83 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_002950 |
|---|
| Strand | - |
|---|
| Start bp | 1696648 |
|---|
| End bp | 1697340 |
|---|
| Gene Length | 693 bp |
|---|
| Protein Length | 230 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 51% |
|---|
| IMG OID | 637150245 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | NP_905745 |
|---|
| Protein GI | 34541266 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | [TIGR02046] succinate dehydrogenase (or fumarate reductase) cytochrome b subunit, b558 family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | n/a |
|---|
| Plasmid unclonability p-value | n/a |
|---|
| Plasmid hitchhiking | n/a |
|---|
| Plasmid clonability | n/a |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 24 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTGGTTAC TTAAATCCTC GATTGGCCGT AAAGTGGTGA TGAGTGTCAC CGGACTGGCG
CTGATCCTGT TTTTGACGTT TCACATGTCC ATGAACCTTG TGGCTCTCTT CTCGGCAGAG
GCTTACAACA TGATATGTGA GTTTCTCGGC GCCAACTGGT ATGCTCTGGT CGCCTCCATC
GGCTTGGCGG TGCTGATGCT TCTGCACATC GTGTATGCCT TTATCCTCAA TGCGCAGAAC
CTTCGTGCTC GAGGTCGCGA TCGCTATGCT GTTACGGGTA GACCTAAAGG AGTGGAGTGG
AGCTCGCAGA ACATGCTGGT GCTCGGTATC ATCGTCCTGT TGGGTATCGG ACTGCACATG
TTCAACTTTT GGGCTAAGAT GCAGTTGGCG GAAATCTGCC ATATGGATGT AGCCGGATTC
GGTATTGATG GTTTCGACCA TCCGGCCAAG GGAGCAGAGC TGATCCGCTA CACATTCAAC
CAACCGATCT ACGTGGTGCT CTATGCCGTA TGGCTGATTG CTTTGTGGTT CCACCTGACA
CATGGATTCT GGAGTGCACT GCAGACCTTG GGATGGAACA ATACCATCTG GATGAATCGT
GTCAAGTGCA TCTCTAATGT GGTTTCTACC GTATTGGTAG GCGGTTTCGC TTTGGTCCTG
ATAGTATTTG CTTGTCAGGC ATTCATCGGT TGA
|
|---|
| Protein sequence | MWLLKSSIGR KVVMSVTGLA LILFLTFHMS MNLVALFSAE AYNMICEFLG ANWYALVASI
GLAVLMLLHI VYAFILNAQN LRARGRDRYA VTGRPKGVEW SSQNMLVLGI IVLLGIGLHM
FNFWAKMQLA EICHMDVAGF GIDGFDHPAK GAELIRYTFN QPIYVVLYAV WLIALWFHLT
HGFWSALQTL GWNNTIWMNR VKCISNVVST VLVGGFALVL IVFACQAFIG
|
|---|
| |