| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PG1614 |
|---|
| Symbol | frdB |
|---|
| ID | 2552830 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Porphyromonas gingivalis W83 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_002950 |
|---|
| Strand | - |
|---|
| Start bp | 1693890 |
|---|
| End bp | 1694645 |
|---|
| Gene Length | 756 bp |
|---|
| Protein Length | 251 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 52% |
|---|
| IMG OID | 637150243 |
|---|
| Product | succinate dehydrogenase/fumarate reductase iron-sulfur subunit |
|---|
| Protein accession | NP_905743 |
|---|
| Protein GI | 34541264 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG0479] Succinate dehydrogenase/fumarate reductase, Fe-S protein subunit |
|---|
| TIGRFAM ID | [TIGR00384] succinate dehydrogenase and fumarate reductase iron-sulfur protein |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | n/a |
|---|
| Plasmid unclonability p-value | n/a |
|---|
| Plasmid hitchhiking | n/a |
|---|
| Plasmid clonability | n/a |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 23 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGATAAGA ATATCAATAT ATCGGTTAAG GTTTGGCGTC AGAAGGGACC GAAGGAAAAA
GGACACTTCG AGACGTATCA ATTGCAAAAC ATTTCGCAAA GTGCCTCTTT CCTCGAAATG
ATGGATATCC TGAACGAGCA GTTGATCAAG GAGCATAAAG CTCCGGTGGT GTTCGACCAC
GACTGTCGCG AAGGTATTTG CGGTATGTGC TCACTCTACA TCAATGGTCA TCCCCACGGG
CCGGACGATA GCATCACCAC TTGTCAGCTG CACATGCGTC GTTTCGATGA TGGTGATACG
ATCACGATAG AGCCTTGGCG CTCGGCCGGC TTCCCTGTGA TCAGAGACCT CATGGTGGAT
CGCTCGGCTT ATGACAAGAT CATTCAGTCC GGCGGATTCG TTTCCGTCAA TACGGGGGGT
ATCCCCGATG CCAACGCTAT CCCCATTTCC AAGAAGAATG CGGATGAGGC CATGGATGCA
GCGGCTTGTA TCGGATGTGG AGCTTGTGCG GCAGCATGCA AGAACGGTTC GGCTATGCTC
TTCGTATCGG CCAAGGTGAG CCAGTTGGCT CTTCTTCCGC AGGGACGTAT CGAGGCTGCG
CGCCGTGCCA AAGCTATGGT GGCCAAGATG GATGAACTCG GATTCGGGAA CTGTACGAAT
ACACGTGCAT GTGAAATGGA ATGCCCGAAG AACGTATCGA TCAGCCACAT TGCCCGTCTG
AATAGGGAGT ACATCGTCGC TAAGAATCGT GACTGA
|
|---|
| Protein sequence | MDKNINISVK VWRQKGPKEK GHFETYQLQN ISQSASFLEM MDILNEQLIK EHKAPVVFDH
DCREGICGMC SLYINGHPHG PDDSITTCQL HMRRFDDGDT ITIEPWRSAG FPVIRDLMVD
RSAYDKIIQS GGFVSVNTGG IPDANAIPIS KKNADEAMDA AACIGCGACA AACKNGSAML
FVSAKVSQLA LLPQGRIEAA RRAKAMVAKM DELGFGNCTN TRACEMECPK NVSISHIARL
NREYIVAKNR D
|
|---|
| |